RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 VWFP04275 2813 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 NPIPB11E5RHQ5 1161 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 OPN1MWP04001 364 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 OPN1MW2P0DN77 364 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 OPN1MW3P0DN78 364 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 GZMHP20718 246 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 VDAC2P45880 294 aaPredicted RBP18.43■□□□□ 0.54
SSBP4-205ENST00000598159 RBM11P57052 281 aaKnown RBP18.43■□□□□ 0.54
SSBP4-205ENST00000598159 RPS11P62280 158 aaKnown RBP eCLIP18.43■□□□□ 0.54
SSBP4-205ENST00000598159 GPR176Q14439 515 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 OGFRL1Q5TC84 451 aaPredicted RBP18.43■□□□□ 0.54
SSBP4-205ENST00000598159 SLC16A12Q6ZSM3 486 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 OR13C5Q8NGS8 318 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 PLPPR1Q8TBJ4 325 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 ORAI1Q96D31 301 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 PGLYRP3Q96LB9 341 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 ZNF184Q99676 751 aaPredicted RBP18.43■□□□□ 0.54
SSBP4-205ENST00000598159 OCSTAMPQ9BR26 566 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 MMP28Q9H239 520 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 PLCXD1Q9NUJ7 323 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 PSORS1C1Q9UIG5 152 aa18.43■□□□□ 0.54
SSBP4-205ENST00000598159 J3QR06 171 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 CASQ2O14958 399 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-205ENST00000598159 OR7C1O76099 320 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-205ENST00000598159 IL1AP01583 271 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 CD28P10747 220 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 SERPINA2P20848 420 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 CD24P25063 80 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 RBM39Q14498 530 aaKnown RBP18.42■□□□□ 0.54
SSBP4-205ENST00000598159 MPV17LQ2QL34 196 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 STX19Q8N4C7 294 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 ZFP41Q8N8Y5 198 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 MRGPRDQ8TDS7 321 aa18.42■□□□□ 0.54
SSBP4-205ENST00000598159 RBM14Q96PK6 669 aaKnown RBP18.42■□□□□ 0.54
SSBP4-205ENST00000598159 AMMECR1Q9Y4X0 333 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-205ENST00000598159 OR2F2O95006 317 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 CD1AP06126 327 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 GNAO1P09471 354 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 GTF2F2P13984 249 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 FSTP19883 344 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 HIST2H2BDQ6DRA6 164 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 NDUFA11Q86Y39 141 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 THNSL2Q86YJ6 484 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 CDH26Q8IXH8 852 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 FBLIM1Q8WUP2 373 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 RPEQ96AT9 228 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 OR5M11Q96RB7 305 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 SLC25A33Q9BSK2 321 aa18.41■□□□□ 0.54
SSBP4-205ENST00000598159 TRBV5-7A0A0A0MS05 114 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 GEMIN2O14893 280 aaKnown RBP18.4■□□□□ 0.54
SSBP4-205ENST00000598159 XPNPEP2O43895 674 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 FAM106CPP0CH98 169 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 NSUN5P1Q3KNT7 163 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 UTF1Q5T230 341 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 LAIR2Q6ISS4 152 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 RFESDQ8TAC1 157 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 VCXQ9H320 206 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 PSG11Q9UQ72 335 aa18.4■□□□□ 0.54
SSBP4-205ENST00000598159 WNT4P56705 351 aa18.39■□□□□ 0.53
SSBP4-205ENST00000598159 SLC22A6Q4U2R8 563 aa18.39■□□□□ 0.53
SSBP4-205ENST00000598159 ATAD3CQ5T2N8 411 aa18.39■□□□□ 0.53
SSBP4-205ENST00000598159 BPIFB6Q8NFQ5 453 aa18.39■□□□□ 0.53
SSBP4-205ENST00000598159 MRPS24Q96EL2 167 aaKnown RBP18.39■□□□□ 0.53
SSBP4-205ENST00000598159 OR14A2Q96R54 314 aa18.39■□□□□ 0.53
SSBP4-205ENST00000598159 ZNF581Q9P0T4 197 aa18.39■□□□□ 0.53
SSBP4-205ENST00000598159 TRAV8-7A0A075B6U6 113 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 TMEM30CPA0ZSE6 113 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A18PA6NE21 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A16PA6NEW6 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A20PA6NIJ5 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A9PA6NNJ1 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A12PA8MX19 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A5PA8MXJ8 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 M0QZK8 103 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 MYL12BO14950 172 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A15PP0C7V4 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A13PP0C7W8 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A14PP0C7W9 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A24PP0C7X0 464 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 CELP19835 753 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 LTC4SQ16873 150 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 AHSA2Q719I0 299 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 CENPVQ7Z7K6 275 aaPredicted RBP18.38■□□□□ 0.53
SSBP4-205ENST00000598159 LYG1Q8N1E2 194 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 NANOGP1Q8N7R0 232 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 OR5AU1Q8NGC0 362 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 THRSPQ92748 146 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 LEAP2Q969E1 77 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 TOMM40LQ969M1 308 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 CITED2Q99967 270 aaPredicted RBP18.38■□□□□ 0.53
SSBP4-205ENST00000598159 ERGIC3Q9Y282 383 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 PLXNB1O43157 2135 aa18.38■□□□□ 0.53
SSBP4-205ENST00000598159 PNMA8CA0A1B0GUJ8 204 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 A0A1W2PPK0 400 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 IGHV3-7P01780 117 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 RAB7AP51149 207 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 MADCAM1Q13477 382 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 DOC2BQ14184 412 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 ABCA11PQ4W5N1 156 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 C1QL4Q86Z23 238 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms