RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 SH2D7A6NKC9 451 aaPredicted RBP13.47□□□□□ -0.25
PNKP-210ENST00000597965 TNFAIP8O95379 198 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 IGKV1D-12P01611 117 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 SNRNP70P08621 437 aaKnown RBP13.47□□□□□ -0.25
PNKP-210ENST00000597965 SMIM18P0DKX4 95 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 TMEM225BP0DP42 221 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 KCNJ3P48549 501 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 DGCR2P98153 550 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 ZNF85Q03923 595 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 C17orf58Q2M2W7 97 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 Q6P435 159 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 SLC35E3Q7Z769 313 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 SERPINA12Q8IW75 414 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 C5orf56Q8N8D9 126 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 KLHL30-AS1Q8NEE0 82 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 OR5D18Q8NGL1 313 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 OR13C9Q8NGT0 318 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 OR56B4Q8NH76 319 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 COQ2Q96H96 371 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 YTHDF1Q9BYJ9 559 aaKnown RBP13.47□□□□□ -0.25
PNKP-210ENST00000597965 ING3Q9NXR8 418 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 MEIKINA0A087WXM9 373 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 HCKP08631 526 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 GDNFP39905 211 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 GLP1RP43220 463 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 KISS1Q15726 138 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 MEDAGQ5VYS4 303 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 TEX38Q6PEX7 206 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 ETV3LQ6ZN32 361 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 RNF144BQ7Z419 303 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 ZNF695Q8IW36 515 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 OR10X1Q8NGY0 326 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 RIBC2Q9H4K1 309 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 LINC00574Q9H8X3 128 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 CALYQ9NYX4 217 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 IDI2-AS1Q9NZ38 188 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 MYRFQ9Y2G1 1151 aa13.46□□□□□ -0.25
PNKP-210ENST00000597965 KMT2CQ8NEZ4 4911 aaKnown RBP13.46□□□□□ -0.26
PNKP-210ENST00000597965 MAGEB3O15480 346 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 SULT1B1O43704 296 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 IL1AP01583 271 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 IGHG2P01859 326 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 VSIG8P0DPA2 414 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 PAX5Q02548 391 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 PAN3Q58A45 887 aaKnown RBP13.45□□□□□ -0.26
PNKP-210ENST00000597965 ZNF691Q5VV52 312 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 ELP2Q6IA86 826 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 C8orf59Q8N0T1 100 aaPredicted RBP13.45□□□□□ -0.26
PNKP-210ENST00000597965 DRAM1Q8N682 238 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 ACBD7Q8N6N7 88 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 SPACA5Q96QH8 159 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 P2RX4Q99571 388 aa13.45□□□□□ -0.26
PNKP-210ENST00000597965 A0A1W2PPI3 338 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 DPPA5A6NC42 116 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 AP4M1O00189 453 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 ZFPL1O95159 310 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 CGB3P0DN86 165 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 CGB7P0DN87 165 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 GTF2A1P52655 376 aaPredicted RBP13.44□□□□□ -0.26
PNKP-210ENST00000597965 NANOS3P60323 173 aaKnown RBP13.44□□□□□ -0.26
PNKP-210ENST00000597965 MRPL28Q13084 256 aaKnown RBP13.44□□□□□ -0.26
PNKP-210ENST00000597965 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 KCTD21Q4G0X4 260 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 SLC25A30Q5SVS4 291 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 STPG2Q8N412 459 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 PXT1Q8NFP0 134 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 OR8U1Q8NH10 309 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
PNKP-210ENST00000597965 NOL4LQ96MY1 436 aaPredicted RBP13.44□□□□□ -0.26
PNKP-210ENST00000597965 PPIL3Q9H2H8 161 aaKnown RBP13.44□□□□□ -0.26
PNKP-210ENST00000597965 PSG11Q9UQ72 335 aa13.44□□□□□ -0.26
PNKP-210ENST00000597965 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
PNKP-210ENST00000597965 NPIPB11E5RHQ5 1161 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 IGKV1D-33P01593 117 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 IGKV1-33P01594 117 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 GAPDHP04406 335 aaKnown RBP13.43□□□□□ -0.26
PNKP-210ENST00000597965 CCDC159P0C7I6 412 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 GZMHP20718 246 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 ALKBH1Q13686 389 aaKnown RBP13.43□□□□□ -0.26
PNKP-210ENST00000597965 IL13RA2Q14627 380 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 KLHL22Q53GT1 634 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 TGIF2LXQ8IUE1 241 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 PARP16Q8N5Y8 322 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 OR51A4Q8NGJ6 313 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 OR5M8Q8NGP6 311 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 CNIH3Q8TBE1 160 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 RNFT2Q96EX2 444 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 MRPS26Q9BYN8 205 aaKnown RBP13.43□□□□□ -0.26
PNKP-210ENST00000597965 KIF25Q9UIL4 384 aa13.43□□□□□ -0.26
PNKP-210ENST00000597965 TMEM212A6NML5 194 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 OR4C45A6NMZ5 311 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 J3QLW9 94 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 J3QRE1 110 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 CCL24O00175 119 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 HSPB6O14558 160 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 MPZL2O60487 215 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 ZNF19P17023 458 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 ZP1P60852 638 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms