RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 IFT22Q9H7X7 185 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 PAK1IP1Q9NWT1 392 aaPredicted RBP12.08□□□□□ -0.48
LIG1-215ENST00000597901 CALYQ9NYX4 217 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 IDI2-AS1Q9NZ38 188 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 TRAV8-7A0A075B6U6 113 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 ZNF780AO75290 641 aaPredicted RBP12.07□□□□□ -0.48
LIG1-215ENST00000597901 OR7C1O76099 320 aaPredicted RBP12.07□□□□□ -0.48
LIG1-215ENST00000597901 CD28P10747 220 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 GZMHP20718 246 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 SERPINA2P20848 420 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 GLP1RP43220 463 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 RBM11P57052 281 aaKnown RBP12.07□□□□□ -0.48
LIG1-215ENST00000597901 TAS2R43P59537 309 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 AHSA2Q719I0 299 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 NANOGP1Q8N7R0 232 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 MRGPRDQ8TDS7 321 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 WIPF2Q8TF74 440 aaPredicted RBP12.07□□□□□ -0.48
LIG1-215ENST00000597901 OR14A2Q96R54 314 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 CKLFQ9UBR5 152 aa12.07□□□□□ -0.48
LIG1-215ENST00000597901 PNMA8CA0A1B0GUJ8 204 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 A0A1W2PP11 408 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 MAGEA13PA6NCF6 341 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 OOSP1A8MZH6 123 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 J3QR06 171 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 PIN1P1O15428 100 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 PEX14O75381 377 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 IL1AP01583 271 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 IGHV3-7P01780 117 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 CD1AP06126 327 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 GTF2F2P13984 249 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 CELP19835 753 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 ARHGDIBP52566 201 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 EMX1Q04741 257 aaPredicted RBP12.06□□□□□ -0.48
LIG1-215ENST00000597901 DOC2BQ14184 412 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 GPR176Q14439 515 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 RBM39Q14498 530 aaKnown RBP12.06□□□□□ -0.48
LIG1-215ENST00000597901 LTC4SQ16873 150 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 SLC22A6Q4U2R8 563 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 ATAD3CQ5T2N8 411 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 C16orf82Q7Z2V1 217 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 CDH26Q8IXH8 852 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 OR10A7Q8NGE5 316 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 LEAP2Q969E1 77 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 MMP28Q9H239 520 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 DCLRE1BQ9H816 532 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 LIN7BQ9HAP6 207 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 FKBP14Q9NWM8 211 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 PSG11Q9UQ72 335 aa12.06□□□□□ -0.48
LIG1-215ENST00000597901 FBXO24O75426 580 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 MNDAP41218 407 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 WNT4P56705 351 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 MPV17LQ2QL34 196 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 ARSJQ5FYB0 599 aaPredicted RBP12.05□□□□□ -0.48
LIG1-215ENST00000597901 CCDC144NLQ6NUI1 221 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 GLIPR1L1Q6UWM5 242 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 LINC00596Q86U02 117 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 LYG1Q8N1E2 194 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 MUL1Q969V5 352 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 AKR1E2Q96JD6 320 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 RBM14Q96PK6 669 aaKnown RBP12.05□□□□□ -0.48
LIG1-215ENST00000597901 NKX1-2Q9UD57 310 aaPredicted RBP12.05□□□□□ -0.48
LIG1-215ENST00000597901 ERGIC3Q9Y282 383 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 CMYA5Q8N3K9 4069 aa12.05□□□□□ -0.48
LIG1-215ENST00000597901 DSCAML1Q8TD84 2053 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 TMEM30CPA0ZSE6 113 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 PTGES3LE9PB15 166 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 MYL12BO14950 172 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 OR2F2O95006 317 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 MT-ND4P03905 459 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 MAS1P04201 325 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 FSTP19883 344 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
LIG1-215ENST00000597901 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 LYPD6Q86Y78 171 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 THNSL2Q86YJ6 484 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 JAGN1Q8N5M9 183 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 CCDC107Q8WV48 283 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 CAPSLQ8WWF8 208 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 RPEQ96AT9 228 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 MRPS24Q96EL2 167 aaKnown RBP12.04□□□□□ -0.48
LIG1-215ENST00000597901 DERL3Q96Q80 235 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 CITED2Q99967 270 aaPredicted RBP12.04□□□□□ -0.48
LIG1-215ENST00000597901 SLC25A33Q9BSK2 321 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 VCXQ9H320 206 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 MRPS28Q9Y2Q9 187 aaKnown RBP12.04□□□□□ -0.48
LIG1-215ENST00000597901 AMMECR1Q9Y4X0 333 aaPredicted RBP12.04□□□□□ -0.48
LIG1-215ENST00000597901 WNK1Q9H4A3 2382 aa12.04□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A18PA6NE21 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A16PA6NEW6 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A20PA6NIJ5 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A9PA6NNJ1 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A12PA8MX19 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A5PA8MXJ8 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 OPN1MWP04001 364 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 AMY1AP04745 511 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms