RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 UTS2BQ765I0 119 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 YIPF7Q8N8F6 280 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 OR51T1Q8NGJ9 327 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 OR13A1Q8NGR1 328 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 DLX4Q92988 240 aaPredicted RBP7.84□□□□□ -1.15
TRIM28-210ENST00000597618 KLK15Q9H2R5 256 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 NCOR1P1Q9H4R4 102 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 ADGRL4Q9HBW9 690 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 CLN6Q9NWW5 311 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 NDE1Q9NXR1 346 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 TVP23BQ9NYZ1 205 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 IGKV1-9A0A0C4DH69 117 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
TRIM28-210ENST00000597618 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
TRIM28-210ENST00000597618 LINC01619G3V211 115 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 HSPB6O14558 160 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 HSPA12AO43301 675 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
TRIM28-210ENST00000597618 UBCP0CG48 685 aaKnown RBP7.83□□□□□ -1.16
TRIM28-210ENST00000597618 RAP2AP10114 183 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 ATF1P18846 271 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 CD1BP29016 333 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 HTR1FP30939 366 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 TMEM236Q5W0B7 351 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 SAXO1Q8IYX7 474 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 DEFB107AQ8IZN7 70 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 TMEM104Q8NE00 496 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 ARPC1AQ92747 370 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 RFT1Q96AA3 541 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 OPALINQ96PE5 141 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 OR4C12Q96R67 309 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 BARHL1Q9BZE3 327 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 NEK6Q9HC98 313 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 ZNF107Q9UII5 783 aaPredicted RBP7.83□□□□□ -1.16
TRIM28-210ENST00000597618 KIF25Q9UIL4 384 aa7.83□□□□□ -1.16
TRIM28-210ENST00000597618 A0A1W2PPE3 182 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 H0YJX3 145 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 TXNL1O43396 289 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 CST1P01037 141 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 ZNF20P17024 532 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 IL3RAP26951 378 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 PPIFP30405 207 aaKnown RBP7.82□□□□□ -1.16
TRIM28-210ENST00000597618 SSTR5P35346 364 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 MTNR1BP49286 362 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 SLURP1P55000 103 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 PITPNAQ00169 270 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 PAX5Q02548 391 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 CDK5R1Q15078 307 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 PAN3Q58A45 887 aaKnown RBP7.82□□□□□ -1.16
TRIM28-210ENST00000597618 DHFR2Q86XF0 187 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 Q8N1Y9 231 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 OR5D18Q8NGL1 313 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 RFESDQ8TAC1 157 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 MRGPRDQ8TDS7 321 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 RTN4IP1Q8WWV3 396 aaPredicted RBP7.82□□□□□ -1.16
TRIM28-210ENST00000597618 ADAT3Q96EY9 351 aaPredicted RBP7.82□□□□□ -1.16
TRIM28-210ENST00000597618 PRRG3Q9BZD7 231 aa7.82□□□□□ -1.16
TRIM28-210ENST00000597618 MRPS28Q9Y2Q9 187 aaKnown RBP7.82□□□□□ -1.16
TRIM28-210ENST00000597618 MAGEA13PA6NCF6 341 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 METTL15A6NJ78 407 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 GNGT2O14610 69 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 PRKYO43930 277 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 SULT1C4O75897 302 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 APOL3O95236 402 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 ANXA8P13928 327 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 KCNJ3P48549 501 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 RAB9AP51151 201 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 F2RL1P55085 397 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 GALEQ14376 348 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 HAGHQ16775 308 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 RSBN1Q5VWQ0 802 aaPredicted RBP7.81□□□□□ -1.16
TRIM28-210ENST00000597618 NXNL2Q5VZ03 156 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 FAM53AQ6NSI3 398 aaPredicted RBP7.81□□□□□ -1.16
TRIM28-210ENST00000597618 SSX6Q7RTT6 188 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 TMEM179BQ7Z7N9 219 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 PRSS35Q8N3Z0 413 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 LINC00311Q8N616 119 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 C8orf31Q8N9H6 132 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 TOLLIPQ9H0E2 274 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 ALX4Q9H161 411 aaPredicted RBP7.81□□□□□ -1.16
TRIM28-210ENST00000597618 H2AFY2Q9P0M6 372 aaPredicted RBP7.81□□□□□ -1.16
TRIM28-210ENST00000597618 TAGLN3Q9UI15 199 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 WSB1Q9Y6I7 421 aa7.81□□□□□ -1.16
TRIM28-210ENST00000597618 TRAV41A0A0B4J266 112 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 TRAV24A0A0B4J272 114 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 FAM90A10PA6NDY2 464 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 ZNF736B4DX44 427 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 G3V318 75 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 ATP6V0E1O15342 81 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 SLC25A17O43808 307 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 MT-ND2P03891 347 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 LGALS1P09382 135 aaKnown RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 SLC2A2P11168 524 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 DBTP11182 482 aaKnown RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 ARSBP15848 533 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 MMDQ15546 238 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 TMEM244Q5VVB8 128 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 BCDIN3DQ7Z5W3 292 aaKnown RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 GID4Q8IVV7 300 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 812.4 ms