RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 PEG10Q86TG7 708 aaKnown RBP7.82□□□□□ -1.16
TRIM28-208ENST00000597172 SNX29P2Q8IUI4 249 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 FGFRL1Q8N441 504 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 FAM216BQ8N7L0 139 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 PLPPR1Q8TBJ4 325 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 C10orf105Q8TEF2 133 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 S100ZQ8WXG8 99 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 RAB1CQ92928 201 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 PHF21AQ96BD5 680 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 SNX22Q96L94 193 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 SRRQ9GZT4 340 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 CHST6Q9GZX3 395 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 DNTTIP1Q9H147 329 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 ZNF665Q9H7R5 613 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 SPACA1Q9HBV2 294 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 MYOZ1Q9NP98 299 aaPredicted RBP7.82□□□□□ -1.16
TRIM28-208ENST00000597172 KAAG1Q9UBP8 84 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 CTSZQ9UBR2 303 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 AK3Q9UIJ7 227 aa7.82□□□□□ -1.16
TRIM28-208ENST00000597172 CEACAM18A8MTB9 384 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 VWC2LB2RUY7 222 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 H3BUI4 141 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 J3QRK9 145 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 HSPB6O14558 160 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 CTDSPLO15194 276 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 NDUFA2O43678 99 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 LANCL1O43813 399 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 CA11O75493 328 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 TK1P04183 234 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 WNT2P09544 360 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 PRSS3P35030 304 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 GPR6P46095 362 aaPredicted RBP7.81□□□□□ -1.16
TRIM28-208ENST00000597172 PPP5CP53041 499 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 DGCR2P98153 550 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 PITPNAQ00169 270 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 ZNF846Q147U1 533 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 BAK1Q16611 211 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 PNLIPRP3Q17RR3 467 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 TMEM155Q4W5P6 130 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 PYDC2Q56P42 97 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 PAN3Q58A45 887 aaKnown RBP7.81□□□□□ -1.16
TRIM28-208ENST00000597172 BAIAP2L2Q6UXY1 529 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 Q6ZPA2 131 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 DCDC5Q6ZRR9 648 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 GAPTQ8N292 157 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 ZNF561Q8N587 486 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 OR52I2Q8NH67 350 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 GPX8Q8TED1 209 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 TIMD4Q96H15 378 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 HDHD3Q9BSH5 251 aaPredicted RBP7.81□□□□□ -1.16
TRIM28-208ENST00000597172 ZNF747Q9BV97 191 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 BPESC1Q9GZL8 116 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 PPA2Q9H2U2 334 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 OCEL1Q9H607 264 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 RABL2AQ9UBK7 228 aaPredicted RBP7.81□□□□□ -1.16
TRIM28-208ENST00000597172 RABL2BQ9UNT1 228 aa7.81□□□□□ -1.16
TRIM28-208ENST00000597172 ISPDA4D126 451 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 SERPINE3A8MV23 424 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 F5H0A9 414 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 ADAM20O43506 726 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 GSTZ1O43708 216 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 NAPSAO96009 420 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 MT-ND4P03905 459 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 SRP14P37108 136 aaKnown RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 DSCR9P59020 149 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 IL13RA1P78552 427 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 AESQ08117 197 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 RBM39Q14498 530 aaKnown RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 ARL6IP1Q15041 203 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 GRK1Q15835 563 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 KCNJ8Q15842 424 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 AWAT1Q58HT5 328 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 RSBN1Q5VWQ0 802 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 CLEC2AQ6UVW9 174 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 ZNF497Q6ZNH5 498 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 C5orf24Q7Z6I8 188 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 MUC20Q8N307 709 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 GDPD1Q8N9F7 314 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 ASCC1Q8N9N2 400 aaKnown RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 NUDCD2Q8WVJ2 157 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 FAM168AQ92567 244 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 COQ2Q96H96 371 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 MED30Q96HR3 178 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 OCSTAMPQ9BR26 566 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 FAM234AQ9H0X4 552 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 PATZ1Q9HBE1 687 aaKnown RBP7.8□□□□□ -1.16
TRIM28-208ENST00000597172 ETAA1Q9NY74 926 aa7.8□□□□□ -1.16
TRIM28-208ENST00000597172 TRAV39A0A0B4J263 110 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 MEIS3P1A6NDR6 274 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 NKX6-3A6NJ46 265 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 GABARAPH6UMI1 98 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 NDUFS8O00217 210 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 SULT1C2O00338 296 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 DVL1O14640 695 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 MGST3O14880 152 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 CSN2P05814 226 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 CD3GP09693 182 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 CSF3P09919 207 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 SLC25A16P16260 332 aa7.79□□□□□ -1.16
TRIM28-208ENST00000597172 CD40LGP29965 261 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms