RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 RASL10BQ96S79 203 aa7.4□□□□□ -1.22
SIN3B-208ENST00000596638 HDHD3Q9BSH5 251 aaPredicted RBP7.4□□□□□ -1.22
SIN3B-208ENST00000596638 DEFB126Q9BYW3 111 aa7.4□□□□□ -1.22
SIN3B-208ENST00000596638 TMEM222Q9H0R3 208 aa7.4□□□□□ -1.22
SIN3B-208ENST00000596638 AKIRIN1Q9H9L7 192 aaPredicted RBP7.4□□□□□ -1.22
SIN3B-208ENST00000596638 LYRM2Q9NU23 88 aaPredicted RBP7.4□□□□□ -1.22
SIN3B-208ENST00000596638 TMEM242Q9NWH2 141 aa7.4□□□□□ -1.22
SIN3B-208ENST00000596638 TREM2Q9NZC2 230 aa7.4□□□□□ -1.22
SIN3B-208ENST00000596638 NXT1Q9UKK6 140 aaKnown RBP7.4□□□□□ -1.22
SIN3B-208ENST00000596638 SLC7A11Q9UPY5 501 aa7.4□□□□□ -1.22
SIN3B-208ENST00000596638 FBXO7Q9Y3I1 522 aa7.4□□□□□ -1.22
SIN3B-208ENST00000596638 CFAP46Q8IYW2 2715 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SDK2Q58EX2 2172 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 IGKV1-27A0A075B6S5 117 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 C3orf85A0A1B0GTC6 90 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 A0A1W2PPE2 198 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 IGSF23A1L1A6 192 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 GJE1A6NN92 205 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 NPIPA2E9PIF3 369 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 NPIPA3F8WFD2 350 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 H3BQ15 152 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 PHF1O43189 567 aaPredicted RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 DFFBO76075 338 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SCAF4O95104 1147 aaKnown RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 DIRAS3O95661 229 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 NRASP01111 189 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 CTXN2P0C2S0 81 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 DAOP14920 347 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 LIFP15018 202 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 CBR1P16152 277 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 AADACP22760 399 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 UCP1P25874 307 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 OPRM1P35372 400 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 PPP1CCP36873 323 aaKnown RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 NKX2-1P43699 371 aaPredicted RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 GLIPR1P48060 266 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 RRADP55042 308 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 NHLH2Q02577 135 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 TLE4Q04727 773 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 TRA2AQ13595 282 aaKnown RBP eCLIP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 KIAA0141Q14154 515 aaPredicted RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 RNPS1Q15287 305 aaKnown RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SP6Q3SY56 376 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 ACER2Q5QJU3 275 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SLC22A25Q6T423 547 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 TMEM182Q6ZP80 229 aaPredicted RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SHISA6Q6ZSJ9 500 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 DPPA2Q7Z7J5 298 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SELENOHQ8IZQ5 122 aaKnown RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 TMEM252Q8N6L7 170 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 ZNF610Q8N9Z0 462 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 AGBL5Q8NDL9 886 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 OR10AD1Q8NGE0 317 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 THAP3Q8WTV1 239 aaPredicted RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 EDARADDQ8WWZ3 215 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 GTF3AQ92664 365 aaKnown RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 FBXO17Q96EF6 278 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 TVP23CQ96ET8 276 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 REEP6Q96HR9 211 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SPSB2Q99619 263 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 GGACTQ9BVM4 153 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SH3BGRL3Q9H299 93 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 WDR54Q9H977 334 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 SH2D2AQ9NP31 389 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 PLEK2Q9NYT0 353 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 IL17BQ9UHF5 180 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 RARRES3Q9UL19 164 aa7.39□□□□□ -1.23
SIN3B-208ENST00000596638 CHCHD2Q9Y6H1 151 aaPredicted RBP7.39□□□□□ -1.23
SIN3B-208ENST00000596638 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
SIN3B-208ENST00000596638 HECTD1Q9ULT8 2610 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 COL6A6A6NMZ7 2263 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 hCG_38984A0A1B0GV85 526 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 NKX2-6A6NCS4 301 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 FAM24AA6NFZ4 105 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 ZNF724A8MTY0 619 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 B4E171 279 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 K7EM74 188 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 TXNL1O43396 289 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 XRCC2O43543 280 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 SCRG1O75711 98 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 TUSC2O75896 110 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 PPYP01298 95 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 ARG1P05089 322 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 OR13C7P0DN81 318 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 TCN2P20062 427 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 S100A2P29034 98 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 TSPAN7P41732 249 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 NPBWR2P48146 333 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 FHITP49789 147 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 RND2P52198 227 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 RBM11P57052 281 aaKnown RBP7.38□□□□□ -1.23
SIN3B-208ENST00000596638 TAS2R30P59541 319 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 UBE2KP61086 200 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 PCBD1P61457 104 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 RAC1P63000 192 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 VAMP2P63027 116 aa7.38□□□□□ -1.23
SIN3B-208ENST00000596638 PNRC1Q12796 327 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms