RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FAUP35544 74 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 IL13RA1P78552 427 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 GRK1Q15835 563 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 PLA1AQ53H76 456 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 VAX1Q5SQQ9 334 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 CENPSQ8N2Z9 138 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 FAM216BQ8N7L0 139 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNRF1Q8ND25 227 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 OR5D13Q8NGL4 314 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 OR4K15Q8NH41 348 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 MED30Q96HR3 178 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 LIME1Q9H400 295 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNF286AQ9HBT8 521 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 ANXA10Q9UJ72 324 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 MED13LQ71F56 2210 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 CENPXA8MT69 81 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 M0QYG6 137 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 ERP29P30040 261 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 HRH1P35367 487 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 TMEM33P57088 247 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 TAS2R46P59540 309 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 AESQ08117 197 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 MEF2DQ14814 521 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 KCNJ8Q15842 424 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 FAAP20Q6NZ36 180 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 LYPD2Q6UXB3 125 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 DUSP18Q8NEJ0 188 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 OR5AP2Q8NGF4 316 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 CTSZQ9UBR2 303 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 KIF25Q9UIL4 384 aa12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 YLPM1P49750 1951 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-211ENST00000595945 TRDCB7Z8K6 153 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 PMP2P02689 132 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 RCC1P18754 421 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 GLIPR1P48060 266 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 P2RX3P56373 397 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 TRIM16LQ309B1 348 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 TMEM155Q4W5P6 130 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 RNASE10Q5GAN6 216 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 KRBOX4Q5JUW0 171 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 Q6ZNX1 250 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 SLC36A1Q7Z2H8 476 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 PEG10Q86TG7 708 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 MUC20Q8N307 709 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 OR56B4Q8NH76 319 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 RAB1CQ92928 201 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 SLC6A7Q99884 636 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 SLC2A8Q9NY64 477 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 MGAT4AQ9UM21 535 aa12.25□□□□□ -0.45
SHKBP1-211ENST00000595945 HECTD1Q9ULT8 2610 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 KIR2DS1A0A191URI9 304 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 ARHGAP32A7KAX9 2087 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 CEACAM18A8MTB9 384 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 ADAM20O43506 726 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 AMY2AP04746 511 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 GSTT2P0CG29 244 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 KIR2DS4P43632 304 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 KRTAP10-9P60411 292 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 HLA-DRB3P79483 266 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 KIR2DS1Q14954 304 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 CDK10Q15131 360 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 HMGN3Q15651 99 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 CR1LQ2VPA4 569 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 CHRFAM7AQ494W8 412 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 AVPI1Q5T686 147 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 CCBE1Q6UXH8 406 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 OVCH2Q7RTZ1 564 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 C5orf24Q7Z6I8 188 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 GLCCI1Q86VQ1 547 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 ARRDC1Q8N5I2 433 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 TMEM185AQ8NFB2 350 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 OR5H2Q8NGV7 314 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 ENKURQ8TC29 256 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 TIMD4Q96H15 378 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 ABCA2Q9BZC7 2435 aa12.24□□□□□ -0.45
SHKBP1-211ENST00000595945 WNK2Q9Y3S1 2297 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 TRAV39A0A0B4J263 110 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 IGKV1-6A0A0C4DH72 117 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 ODAMA1E959 279 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 TMPRSS2O15393 492 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 FABP7O15540 132 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 PPIHO43447 177 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 SCTP09683 121 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 CGB3P0DN86 165 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 CGB7P0DN87 165 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 GIFP27352 417 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 CCR6P51684 374 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNF660Q6AZW8 331 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNF554Q86TJ5 538 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 FGFRL1Q8N441 504 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 TPRX1Q8N7U7 411 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 OR13A1Q8NGR1 328 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms