RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CDKN1BP46527 198 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 CLDN18P56856 261 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 DLK1P80370 383 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 SRYQ05066 204 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 ENDOGQ14249 297 aaKnown RBP13.3□□□□□ -0.28
PNKP-204ENST00000594661 C1orf194Q5T5A4 169 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 PLXDC2Q6UX71 529 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 AQP3Q92482 292 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 OR10C1Q96KK4 312 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 ZNF552Q9H707 407 aaPredicted RBP13.3□□□□□ -0.28
PNKP-204ENST00000594661 CDH20Q9HBT6 801 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 RHBDD3Q9Y3P4 386 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 NCOA6Q14686 2063 aaPredicted RBP13.29□□□□□ -0.28
PNKP-204ENST00000594661 A0A1W2PPQ1 181 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 A8MXE2 369 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 FCGR2CP31995 323 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 RRADP55042 308 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 PAX5Q02548 391 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 TEX38Q6PEX7 206 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 IGF2-ASQ6U949 168 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 SLC16A14Q7RTX9 510 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 FAM219AQ8IW50 185 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 C1orf87Q8N0U7 546 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 SLC22A24Q8N4F4 322 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 OR1P1Q8NH06 330 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 DIRC2Q96SL1 478 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 ZMAT3Q9HA38 289 aaKnown RBP13.29□□□□□ -0.28
PNKP-204ENST00000594661 LPAR2Q9HBW0 351 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 GPR84Q9NQS5 396 aa13.29□□□□□ -0.28
PNKP-204ENST00000594661 OR4A8P0C604 315 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 CEACAM1P13688 526 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 TMEM11P17152 192 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 RND2P52198 227 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 GRB2P62993 217 aaKnown RBP13.28□□□□□ -0.28
PNKP-204ENST00000594661 TLE4Q04727 773 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 FAM57BQ71RH2 274 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 AAED1Q7RTV5 226 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 TMPRSS7Q7RTY8 843 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.28□□□□□ -0.28
PNKP-204ENST00000594661 TMEM104Q8NE00 496 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 PTX4Q96A99 478 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 FAM71F1Q96KD3 344 aaPredicted RBP13.28□□□□□ -0.28
PNKP-204ENST00000594661 GINS3Q9BRX5 216 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 ZNF319Q9P2F9 582 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
PNKP-204ENST00000594661 CA11O75493 328 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 CD46P15529 392 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 ZNF708P17019 499 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 ARG2P78540 354 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 IQCJQ1A5X6 159 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 NCR3LG1Q68D85 454 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 MARCH1Q8TCQ1 289 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 TMEM230Q96A57 120 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 ALKBH3Q96Q83 286 aaPredicted RBP13.28□□□□□ -0.28
PNKP-204ENST00000594661 URM1Q9BTM9 101 aaKnown RBP13.28□□□□□ -0.28
PNKP-204ENST00000594661 COL25A1Q9BXS0 654 aaPredicted RBP13.28□□□□□ -0.28
PNKP-204ENST00000594661 DLL3Q9NYJ7 618 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 VAX2Q9UIW0 290 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 RAB22AQ9UL26 194 aa13.28□□□□□ -0.28
PNKP-204ENST00000594661 CEACAM18A8MTB9 384 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 KLRC4-KLRK1H3BQV0 150 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 TMEM33P57088 247 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 SLC25A26Q70HW3 274 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 HAS2Q92819 552 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 FAM46BQ96A09 425 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 MEMO1Q9Y316 297 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 LIPGQ9Y5X9 500 aa13.27□□□□□ -0.28
PNKP-204ENST00000594661 B4DEV8 164 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 GEMIN2O14893 280 aaKnown RBP13.27□□□□□ -0.29
PNKP-204ENST00000594661 BPNT1O95861 308 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 ZNF93P35789 620 aaPredicted RBP13.27□□□□□ -0.29
PNKP-204ENST00000594661 FHITP49789 147 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 CCL11P51671 97 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 S100A10P60903 97 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 ZNF766Q5HY98 468 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 RIPPLY2Q5TAB7 128 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 AADACL3Q5VUY0 350 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 CLEC18BQ6UXF7 455 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 SLC35E3Q7Z769 313 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 TRAPPC6BQ86SZ2 158 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 ZFP62Q8NB50 900 aaPredicted RBP13.27□□□□□ -0.29
PNKP-204ENST00000594661 GJC3Q8NFK1 279 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 SPACA5Q96QH8 159 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 FAAP24Q9BTP7 215 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 SLC5A6Q9Y289 635 aa13.27□□□□□ -0.29
PNKP-204ENST00000594661 ZNF407Q9C0G0 2248 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 TMEM238LA0A1B0GVL6 79 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 SRP19P09132 144 aaKnown RBP13.26□□□□□ -0.29
PNKP-204ENST00000594661 BRS3P32247 399 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 HRH1P35367 487 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 MRPS34P82930 218 aaKnown RBP13.26□□□□□ -0.29
PNKP-204ENST00000594661 UNC119Q13432 240 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 C3AR1Q16581 482 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 ANKRD55Q3KP44 614 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 ZNF260Q3ZCT1 412 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 C4orf17Q53FE4 359 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 RNASE8Q8TDE3 154 aaKnown RBP13.26□□□□□ -0.29
PNKP-204ENST00000594661 PGAM5Q96HS1 289 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 RARRES2Q99969 163 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms