RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 MOB3CQ70IA8 216 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 KRT73Q86Y46 540 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 TRIML2Q8N7C3 387 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 RNF148Q8N7C7 305 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 TCEANCQ8N8B7 351 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 TEX45Q8NA69 505 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 DNAAF1Q8NEP3 725 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 GPR32P1Q8NGA4 272 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 OR13C2Q8NGS9 318 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 GRPEL2Q8TAA5 225 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 TMEM239Q8WW34 195 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 COQ2Q96H96 371 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 OR52E6Q96RD3 313 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 ZNF251Q9BRH9 671 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 C6orf62Q9GZU0 229 aaPredicted RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 MRPL22Q9NWU5 206 aaKnown RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 CALYQ9NYX4 217 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 IDI2-AS1Q9NZ38 188 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 GRHPRQ9UBQ7 328 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 BTNL2Q9UIR0 455 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 EMCNQ9ULC0 261 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 SAMD4AQ9UPU9 718 aaKnown RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 DMRT1Q9Y5R6 373 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 USH2AO75445 5202 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 IGHV3-43A0A0B4J1X8 118 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 TRAV39A0A0B4J263 110 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 TRAV25A0A0B4J276 109 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 KBTBD11-OT1A0A1B0GTJ5 212 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 SCO2A0A1W2PP80 73 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ZNF320A2RRD8 509 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 TVP23AA6NH52 213 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ZNF729A6NN14 1252 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 E9PBE3 544 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 LOC110117498-PIK3R3F6TDL0 507 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 PGRMC1O00264 195 aaKnown RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 RRHO14718 337 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 NDUFA3O95167 84 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 CHEK2O96017 543 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 IGLV2-11P01706 119 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 PRH1P02810 166 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 CD14P08571 375 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 CGB3P0DN86 165 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 CGB7P0DN87 165 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 IGHV3-43DP0DP04 118 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 CLUP10909 449 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 IFI30P13284 250 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 HOXB9P17482 250 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 AADACP22760 399 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 IL12AP29459 219 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 HTR1FP30939 366 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 S100A3P33764 101 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 SSTR5P35346 364 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 MAS1LP35410 378 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ANP32AP39687 249 aaKnown RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 TFPI2P48307 235 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ZNF121P58317 390 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 ZNF91Q05481 1191 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 BNIP1Q12981 228 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ATXN7L3Q14CW9 347 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 PLGLAQ15195 96 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 LINC01620Q4KN68 170 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ZNF585BQ52M93 769 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 PGM2L1Q6PCE3 622 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 MORN3Q6PF18 240 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 UNQ9165/PRO28630Q6UXU0 137 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 Q6ZRU5 148 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 SLC16A12Q6ZSM3 486 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ASRGL1Q7L266 308 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 PRSS45Q7RTY3 260 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 DCXRQ7Z4W1 244 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 FTMTQ8N4E7 242 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 SETD9Q8NE22 299 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 BBS1Q8NFJ9 593 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 TSPEARQ8WU66 669 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 THRSPQ92748 146 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 FAM46BQ96A09 425 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 SLAMF9Q96A28 289 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 TESCQ96BS2 214 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 SLAMF6Q96DU3 332 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 PGAM5Q96HS1 289 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 PKNOX2Q96KN3 472 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 PPP1R36Q96LQ0 422 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 NR1H4Q96RI1 486 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 SORT1Q99523 831 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 KCNJ15Q99712 375 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 SPAG8Q99932 426 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 OSBPL10Q9BXB5 764 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 AKTIPQ9H8T0 292 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 NMNAT1Q9HAN9 279 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 TPT1P8Q9HAU6 139 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 DNAJC4Q9NNZ3 241 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ABCB9Q9NP78 766 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 MTCH1Q9NZJ7 389 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 ZNF230Q9UIE0 474 aaPredicted RBP2.06□□□□□ -2.08
VRK3-204ENST00000593912 RNF150Q9ULK6 438 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 TBC1D24Q9ULP9 559 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 B9D1Q9UPM9 204 aa2.06□□□□□ -2.08
VRK3-204ENST00000593912 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
VRK3-204ENST00000593912 OR5B21A6NL26 309 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 H3BQF6 201 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms