RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 EFCAB10A6NFE3 127 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 SH2D1BO14796 132 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 CSN2P05814 226 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 HCKP08631 526 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 IGFBP3P17936 291 aaPredicted RBP11.72□□□□□ -0.53
PNKP-202ENST00000593706 RAB3AP20336 220 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 OR3A4PP47883 348 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 AESQ08117 197 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 EGFEM1PQ0D2K5 195 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 TPTE2P1Q5T6R2 138 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 CCDC144NLQ6NUI1 221 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 OSR2Q8N2R0 312 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 LINC00482Q8N8I6 264 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 OR4D6Q8NGJ1 314 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 OR13C5Q8NGS8 318 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 GHSRQ92847 366 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 NEK6Q9HC98 313 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 ING3Q9NXR8 418 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 TAS2R3Q9NYW6 316 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 MOB4Q9Y3A3 225 aa11.72□□□□□ -0.53
PNKP-202ENST00000593706 ERICH4A6NGS2 130 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 NUDT19A8MXV4 375 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 SLC33A1O00400 549 aaPredicted RBP11.71□□□□□ -0.53
PNKP-202ENST00000593706 AMY1AP04745 511 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 AMY2AP04746 511 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 VSIG8P0DPA2 414 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 ZNF44P15621 663 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 NFYBP25208 207 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 CD34P28906 385 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 C21orf33P30042 268 aaPredicted RBP11.71□□□□□ -0.53
PNKP-202ENST00000593706 GDNFP39905 211 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 GLIPR1P48060 266 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 PRRX1P54821 245 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 SCN1BQ07699 218 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 DCTN2Q13561 401 aaKnown RBP11.71□□□□□ -0.53
PNKP-202ENST00000593706 CHST4Q8NCG5 386 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 COQ2Q96H96 371 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 WWC2-AS2Q96NR7 200 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 B9D2Q9BPU9 175 aa11.71□□□□□ -0.53
PNKP-202ENST00000593706 STAB2Q8WWQ8 2551 aa11.71□□□□□ -0.54
PNKP-202ENST00000593706 TRBV5-7A0A0A0MS05 114 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 ODAMA1E959 279 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 MAGEA13PA6NCF6 341 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 GPX5O75715 221 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 CD2P06729 351 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 FAM106CPP0CH98 169 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 TMEM225BP0DP42 221 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 FSTP19883 344 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 MTNR1BP49286 362 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 PAX5Q02548 391 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 ATXN7L3Q14CW9 347 aaPredicted RBP11.7□□□□□ -0.54
PNKP-202ENST00000593706 YIF1BQ5BJH7 314 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 KRBOX4Q5JUW0 171 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 AHSA2Q719I0 299 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 ZNF329Q86UD4 541 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
PNKP-202ENST00000593706 ZFP41Q8N8Y5 198 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 CORO2AQ92828 525 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 TOMM40LQ969M1 308 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 RPEQ96AT9 228 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 ORAI1Q96D31 301 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 TMEM138Q9NPI0 162 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 IL36GQ9NZH8 169 aa11.7□□□□□ -0.54
PNKP-202ENST00000593706 AMMECR1Q9Y4X0 333 aaPredicted RBP11.7□□□□□ -0.54
PNKP-202ENST00000593706 TRAV8-7A0A075B6U6 113 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 TRAV24A0A0B4J272 114 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 ZNF729A6NN14 1252 aaPredicted RBP11.69□□□□□ -0.54
PNKP-202ENST00000593706 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 H0YJX3 145 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 AQP4P55087 323 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 RPL23AP62750 156 aaKnown RBP11.69□□□□□ -0.54
PNKP-202ENST00000593706 HES1Q14469 280 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 Q499Y3 187 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 NHLRC3Q5JS37 347 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 RNLSQ5VYX0 342 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 ETV3LQ6ZN32 361 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 TNFAIP8L1Q8WVP5 186 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 CPNE2Q96FN4 548 aaPredicted RBP11.69□□□□□ -0.54
PNKP-202ENST00000593706 MCRIP2Q9BUT9 160 aaKnown RBP11.69□□□□□ -0.54
PNKP-202ENST00000593706 VCXQ9H320 206 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 PCDHB16Q9NRJ7 776 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 ZNF581Q9P0T4 197 aa11.69□□□□□ -0.54
PNKP-202ENST00000593706 CD1AP06126 327 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 SNRNP70P08621 437 aaKnown RBP11.68□□□□□ -0.54
PNKP-202ENST00000593706 GLP1RP43220 463 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 THBS3P49746 956 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 WNT4P56705 351 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 TAS2R43P59537 309 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 MED21Q13503 144 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 IL13RA2Q14627 380 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 PIGYQ3MUY2 71 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 DDI2Q5TDH0 399 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 C8orf86Q6ZUL3 223 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 LYPD6Q86Y78 171 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 NANOGP1Q8N7R0 232 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 KLHL30-AS1Q8NEE0 82 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms