RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 ZNF286AQ9HBT8 521 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 PCDHB16Q9NRJ7 776 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 KBTBD11-OT1A0A1B0GTJ5 212 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 CRTAPO75718 401 aaPredicted RBP12.7□□□□□ -0.38
LIG3-215ENST00000592690 SRMP19623 302 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 GABARAPL2P60520 117 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 AANATQ16613 207 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 OR52W1Q6IF63 320 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 Q6ZSV7 163 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 ZNF367Q7RTV3 350 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 ABHD12Q8N2K0 398 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 NEK7Q8TDX7 302 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 FAM46BQ96A09 425 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 MALSU1Q96EH3 234 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 MRPS24Q96EL2 167 aaKnown RBP12.7□□□□□ -0.38
LIG3-215ENST00000592690 KIRREL1Q96J84 757 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 SELENOIQ9C0D9 397 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 NCOR1P1Q9H4R4 102 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 RCC2Q9P258 522 aaKnown RBP12.7□□□□□ -0.38
LIG3-215ENST00000592690 MMP24Q9Y5R2 645 aa12.7□□□□□ -0.38
LIG3-215ENST00000592690 VGLL3A8MV65 326 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 SSTR5P35346 364 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 RAB13P51153 203 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 FABP5Q01469 135 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 EMX1Q04741 257 aaPredicted RBP12.69□□□□□ -0.38
LIG3-215ENST00000592690 TRAM1Q15629 374 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 SSX1Q16384 188 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 MINOS1Q5TGZ0 78 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 GLT8D1Q68CQ7 371 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 SLC35E4Q6ICL7 350 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 NDNFQ8TB73 568 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 Q96M66 194 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 GFI1Q99684 422 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 SLITRK2Q9H156 845 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 KCNK15Q9H427 330 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 Q9H521 79 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 BEX1Q9HBH7 125 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 HILPDAQ9Y5L2 63 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 MINOS1-NBL1R4GNA1 71 aa12.69□□□□□ -0.38
LIG3-215ENST00000592690 A0A087X0M5 115 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 A0A1B0GX30 115 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 TMEM30CPA0ZSE6 113 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 CLPSL1A2RUU4 121 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 POM121CA8CG34 1229 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 CHST1O43916 411 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 IL1AP01583 271 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 NFYBP25208 207 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 PSMA1P25786 263 aaKnown RBP12.68□□□□□ -0.38
LIG3-215ENST00000592690 CD34P28906 385 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 OLFML2AQ68BL7 652 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 SIGIRRQ6IA17 410 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 OR10K2Q6IF99 312 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 RAB12Q6IQ22 244 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 RTN4RL2Q86UN3 420 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 ZNF565Q8N9K5 539 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 IDI2-AS1Q9NZ38 188 aa12.68□□□□□ -0.38
LIG3-215ENST00000592690 A0A1B0GUS0 222 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 NPIPB11E5RHQ5 1161 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 MPIG6BO95866 241 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 IGHV3-7P01780 117 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 VSIG8P0DPA2 414 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 CD37P11049 281 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 HTR1DP28221 377 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 HTR2CP28335 458 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 GABRA5P31644 462 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 SRSF4Q08170 494 aaKnown RBP12.67□□□□□ -0.38
LIG3-215ENST00000592690 LTC4SQ16873 150 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 RFESDQ8TAC1 157 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 ZNF596Q8TC21 504 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 CCDC107Q8WV48 283 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 WFDC12Q8WWY7 111 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 CST11Q9H112 138 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 SPACA1Q9HBV2 294 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 GHRLQ9UBU3 117 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 TCF19Q9Y242 345 aa12.67□□□□□ -0.38
LIG3-215ENST00000592690 AK6Q9Y3D8 172 aaKnown RBP12.67□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A10PA6NDY2 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A18PA6NE21 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A16PA6NEW6 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A20PA6NIJ5 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A7PA6NKC0 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A22PA8MWA6 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A12PA8MX19 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A5PA8MXJ8 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 FAM90A23PA8MXZ1 464 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 MCRIP1C9JLW8 97 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 AIPO00170 330 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 SLC22A1O15245 554 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 MRPS14O60783 128 aaKnown RBP12.66□□□□□ -0.38
LIG3-215ENST00000592690 ARL6IP5O75915 188 aa12.66□□□□□ -0.38
LIG3-215ENST00000592690 TSPAN9O75954 239 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms