RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NHLRC3Q5JS37 347 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 Q6ZS46 218 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 DTX3Q8N9I9 347 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 ZNF565Q8N9K5 539 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 MRGPRDQ8TDS7 321 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 CFHR4Q92496 578 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 S100A13Q99584 98 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 DPCDQ9BVM2 203 aaPredicted RBP11.14□□□□□ -0.63
APOC1-208ENST00000592535 VCXQ9H320 206 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 FKBP14Q9NWM8 211 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 CKLFQ9UBR5 152 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 LRRC42Q9Y546 428 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 LY6LH3BQJ8 138 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 BUB1B-PAK6H3BSN5 160 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 GEMIN2O14893 280 aaKnown RBP11.13□□□□□ -0.63
APOC1-208ENST00000592535 IL1AP01583 271 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 IGHV3-7P01780 117 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 CSF1P09603 554 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 CELP19835 753 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 KCNJ3P48549 501 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 PRRX1P54821 245 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 BLCAPP62952 87 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 DEFA6Q01524 100 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 PAX5Q02548 391 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 RBM39Q14498 530 aaKnown RBP11.13□□□□□ -0.63
APOC1-208ENST00000592535 LTC4SQ16873 150 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 SLC22A6Q4U2R8 563 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 NANOGP1Q8N7R0 232 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 FAM110DQ8TAY7 271 aaPredicted RBP11.13□□□□□ -0.63
APOC1-208ENST00000592535 LEAP2Q969E1 77 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 MUL1Q969V5 352 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 DERL3Q96Q80 235 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 PRSS22Q9GZN4 317 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 IFT22Q9H7X7 185 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 PAK1IP1Q9NWT1 392 aaPredicted RBP11.13□□□□□ -0.63
APOC1-208ENST00000592535 IDI2-AS1Q9NZ38 188 aa11.13□□□□□ -0.63
APOC1-208ENST00000592535 NPIPB11E5RHQ5 1161 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 PIN1P1O15428 100 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 ZNF780AO75290 641 aaPredicted RBP11.12□□□□□ -0.63
APOC1-208ENST00000592535 MAS1P04201 325 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 CD1AP06126 327 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 BRS3P32247 399 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 SSTR5P35346 364 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 CEACAM3P40198 252 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 MPV17LQ2QL34 196 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 ATAD3CQ5T2N8 411 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 TPTE2P1Q5T6R2 138 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 JAGN1Q8N5M9 183 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 OR9G1Q8NH87 305 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 RFESDQ8TAC1 157 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 OR5M11Q96RB7 305 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 MMP28Q9H239 520 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 VCX3BQ9H321 246 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 LINC00574Q9H8X3 128 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 ERGIC3Q9Y282 383 aa11.12□□□□□ -0.63
APOC1-208ENST00000592535 MRPS28Q9Y2Q9 187 aaKnown RBP11.12□□□□□ -0.63
APOC1-208ENST00000592535 CMYA5Q8N3K9 4069 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 J3QR06 171 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 CDK1P06493 297 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 GTF2F2P13984 249 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 ARHGDIBP52566 201 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 AQP4P55087 323 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 ARSJQ5FYB0 599 aaPredicted RBP11.11□□□□□ -0.63
APOC1-208ENST00000592535 C6orf141Q5SZD1 244 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 GLIPR1L1Q6UWM5 242 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 LYG1Q8N1E2 194 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 WIPF2Q8TF74 440 aaPredicted RBP11.11□□□□□ -0.63
APOC1-208ENST00000592535 CREB3L1Q96BA8 519 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 PCDHB16Q9NRJ7 776 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
APOC1-208ENST00000592535 VWFP04275 2813 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 TMEM30CPA0ZSE6 113 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 PTGES3LE9PB15 166 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 FBXO24O75426 580 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 CD28P10747 220 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 GNG10P50151 68 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 GPR176Q14439 515 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 INSL4Q14641 139 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 AWAT2Q6E213 333 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 IZUMO2Q6UXV1 221 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 C16orf82Q7Z2V1 217 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 LYPD6Q86Y78 171 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 NEK7Q8TDX7 302 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 SGCDQ92629 289 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 TOMM40LQ969M1 308 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 SLC25A33Q9BSK2 321 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 MND1Q9BWT6 205 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 LIN7BQ9HAP6 207 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 PSG11Q9UQ72 335 aa11.1□□□□□ -0.63
APOC1-208ENST00000592535 AMMECR1Q9Y4X0 333 aaPredicted RBP11.1□□□□□ -0.63
APOC1-208ENST00000592535 OOSP1A8MZH6 123 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 H3BUI4 141 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 PEX14O75381 377 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 MNDAP41218 407 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
APOC1-208ENST00000592535 DIAPH2-AS1Q14236 149 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms