RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CD2P06729 351 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 HSMCR30P0CW71 290 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 JUNBP17275 347 aaPredicted RBP8.32□□□□□ -1.08
VPS4B-207ENST00000591519 RAB3AP20336 220 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 GABRR1P24046 479 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 DUSP1P28562 367 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 CD34P28906 385 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 MAP2K4P45985 399 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 OR3A1P47881 315 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 LOXL3P58215 753 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 HEPN1Q6WQI6 88 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 SERPINA12Q8IW75 414 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 ABHD12Q8N2K0 398 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 OR5AU1Q8NGC0 362 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 OR5D14Q8NGL3 314 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 ZNF596Q8TC21 504 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 TMEM106AQ96A25 262 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 OR14A2Q96R54 314 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 GPER1Q99527 375 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 ZNF184Q99676 751 aaPredicted RBP8.32□□□□□ -1.08
VPS4B-207ENST00000591519 MND1Q9BWT6 205 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 CHST6Q9GZX3 395 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 LIN7BQ9HAP6 207 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 A0A087X0M5 115 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 A0A1B0GX30 115 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 FUOMA2VDF0 154 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 LY6LH3BQJ8 138 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 PIN1P1O15428 100 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 PEX14O75381 377 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 KDM4BO94953 1096 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 CSN2P05814 226 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 TMEM225BP0DP42 221 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 PRKACAP17612 351 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 CRHBPP24387 322 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 BRS3P32247 399 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
VPS4B-207ENST00000591519 TAS2R43P59537 309 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 SLC35A2P78381 396 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 INSL4Q14641 139 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 TCTEX1D4Q5JR98 221 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 SAXO1Q8IYX7 474 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 PARP16Q8N5Y8 322 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 CHST4Q8NCG5 386 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 NDNFQ8TB73 568 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 CREB3L1Q96BA8 519 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 PHF21AQ96BD5 680 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 AKR1E2Q96JD6 320 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 PGLYRP3Q96LB9 341 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 TMED9Q9BVK6 235 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 FAM192AQ9GZU8 254 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 GAL3ST2Q9H3Q3 398 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 Q9H521 79 aa8.31□□□□□ -1.08
VPS4B-207ENST00000591519 TRGV10A0A0A0MS01 117 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 LEUTXA8MZ59 168 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 OOSP1A8MZH6 123 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 MAGEB3O15480 346 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 OR2H2O95918 312 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 CGB3P0DN86 165 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 CGB7P0DN87 165 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 CDK2P24941 298 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 GLIPR1P48060 266 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 RPS11P62280 158 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 PPP3R1P63098 170 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 SCN1BQ07699 218 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 IRF3Q14653 427 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 SPHARQ15513 63 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 KISS1Q15726 138 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 Q499Y3 187 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 YIF1BQ5BJH7 314 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 RBM48Q5RL73 367 aaKnown RBP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 LIPKQ5VXJ0 399 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 Q6P435 159 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 BAIAP2L2Q6UXY1 529 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 CENPVQ7Z7K6 275 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 OR10K1Q8NGX5 313 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 MRAPQ8TCY5 172 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 TNFAIP8L1Q8WVP5 186 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 RBM14Q96PK6 669 aaKnown RBP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 NR1H4Q96RI1 486 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 NCOR1P1Q9H4R4 102 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 DUSP21Q9H596 190 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 EXOSC4Q9NPD3 245 aaKnown RBP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 AURKAIP1Q9NWT8 199 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 ING4Q9UNL4 249 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 GSTK1Q9Y2Q3 226 aa8.3□□□□□ -1.08
VPS4B-207ENST00000591519 LSM2Q9Y333 95 aaKnown RBP8.3□□□□□ -1.08
VPS4B-207ENST00000591519 TRAV8-7A0A075B6U6 113 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 TRBV5-5A0A0J9YX44 114 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 ODAMA1E959 279 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 MAGEA13PA6NCF6 341 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A18PA6NE21 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A16PA6NEW6 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A20PA6NIJ5 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A9PA6NNJ1 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A12PA8MX19 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A5PA8MXJ8 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 BUB1B-PAK6H3BSN5 160 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 SIRPB1O00241 398 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms