RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 TEX36Q5VZQ5 186 aa19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 LYG2Q86SG7 212 aa19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 ADAD2Q8NCV1 583 aaKnown RBP19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 MOB3AQ96BX8 217 aa19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 TRAF4Q9BUZ4 470 aaPredicted RBP19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 SHARPINQ9H0F6 387 aa19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 PCDHB10Q9UN67 800 aa19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 PPP1R3CQ9UQK1 317 aa19.09■□□□□ 0.65
CAPNS1-207ENST00000589146 NPIPB11E5RHQ5 1161 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 CXCL3P19876 107 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 FCGR2CP31995 323 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 SEC61A1P61619 476 aaKnown RBP19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 HERPUD1Q15011 391 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 HMGN3Q15651 99 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 TMEM128Q5BJH2 165 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 IGSF11Q5DX21 431 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 ANGPTL6Q8NI99 470 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 ZFAND1Q8TCF1 268 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 TMEM230Q96A57 120 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 SNX22Q96L94 193 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 FYTTD1Q96QD9 318 aaKnown RBP19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 FXYD6Q9H0Q3 95 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 DYNLRB1Q9NP97 96 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 METRNQ9UJH8 293 aa19.08■□□□□ 0.64
CAPNS1-207ENST00000589146 IGKV1-6A0A0C4DH72 117 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 C9orf170A2RU37 121 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 TUSC2O75896 110 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 IRF2P14316 349 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 MUC1P15941 1255 aaPredicted RBP19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 RCC1P18754 421 aaPredicted RBP19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 EIF2B2P49770 351 aaKnown RBP19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 CCL8P80075 99 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 PPP1R1AQ13522 171 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 ATXN7L3Q14CW9 347 aaPredicted RBP19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 STUMQ69YW2 141 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 C12orf45Q8N5I9 185 aaPredicted RBP19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 BOLLQ8N9W6 283 aaKnown RBP19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 OR2AK2Q8NG84 335 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 PPP1R35Q8TAP8 253 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 SDSLQ96GA7 329 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 COQ2Q96H96 371 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 NCOR1P1Q9H4R4 102 aa19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 FBXO9Q9UK97 447 aaPredicted RBP19.07■□□□□ 0.64
CAPNS1-207ENST00000589146 CHD6Q8TD26 2715 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 TRBV6-7A0A0A0MS04 114 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 LRRC30A6NM36 301 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 TK1P04183 234 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 ANXA3P12429 323 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 PGAM2P15259 253 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 CD80P33681 288 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 MUC15Q8N387 334 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 OR5T2Q8NGG2 359 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 MITD1Q8WV92 249 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 BBC3Q96PG8 261 aaPredicted RBP19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 ZNF436Q9C0F3 470 aaPredicted RBP19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 SAP30LQ9HAJ7 183 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 TRAPPC2LQ9UL33 140 aa19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 C14orf166Q9Y224 244 aaKnown RBP19.06■□□□□ 0.64
CAPNS1-207ENST00000589146 IGHV3OR15-7A0A075B7D8 119 aa19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 CYB5R3P00387 301 aaPredicted RBP19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 ZNF728P0DKX0 622 aa19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 IGFBP2P18065 325 aa19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 AADACP22760 399 aa19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 TMPRSS13Q9BYE2 586 aa19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 MGAT4CQ9UBM8 478 aa19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 SLC23A1Q9UHI7 598 aa19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 ANKHD1Q8IWZ3 2542 aaKnown RBP19.05■□□□□ 0.64
CAPNS1-207ENST00000589146 A0A0B4J2A0 478 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 OOEPA6NGQ2 149 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 K7N7A8 449 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 MGST3O14880 152 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 OR2A4O95047 310 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 SFT2D2O95562 160 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 DUS4LO95620 317 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 PPYP01298 95 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 HLA-AP01891 365 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 C1QBP02746 253 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 TFF1P04155 84 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 AKR1C4P17516 323 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 RBMXP38159 391 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 PPOXP50336 477 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 SNRPD2P62316 118 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 IL13RA1P78552 427 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 ZFP69Q49AA0 526 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 IGSF10Q6WRI0 2623 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 C5orf24Q7Z6I8 188 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 SLC38A6Q8IZM9 456 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 C1orf87Q8N0U7 546 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 ZCCHC24Q8N2G6 241 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 ZNF561Q8N587 486 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 OR2A7Q96R45 310 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 RSRP1Q9BUV0 290 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 SHPKQ9UHJ6 478 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 KIF25Q9UIL4 384 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 ICE1Q9Y2F5 2266 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 DYSFO75923 2080 aa19.04■□□□□ 0.64
CAPNS1-207ENST00000589146 TMEM178BH3BS89 294 aa19.03■□□□□ 0.64
CAPNS1-207ENST00000589146 LGALS8O00214 317 aa19.03■□□□□ 0.64
CAPNS1-207ENST00000589146 RPS2P15880 293 aaKnown RBP19.03■□□□□ 0.64
CAPNS1-207ENST00000589146 HLA-GP17693 338 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms