RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TMED1Q13445 227 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 PYDC2Q56P42 97 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 NXNL2Q5VZ03 156 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF470Q6ECI4 717 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 FAM183BPQ6ZVS7 135 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 OR2AE1Q8NHA4 323 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 ACTL9Q8TC94 416 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 APOBEC3DQ96AK3 386 aaPredicted RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 TMIGD2Q96BF3 282 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 OTUB2Q96DC9 234 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 LINC01587Q99440 93 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 MFSD1Q9H3U5 465 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 IFT46Q9NQC8 304 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 COL5A1P20908 1838 aaPredicted RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 DHX57Q6P158 1386 aaKnown RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 UBR5O95071 2799 aaPredicted RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF407Q9C0G0 2248 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 FAM208BQ5VWN6 2430 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 FLNAP21333 2647 aaKnown RBP1.66□□□□□ -2.14
SMAD4-207ENST00000589076 FAM183AA6NL82 134 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 A8MWP4 228 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 RNASEK-C17orf49H0YIS7 233 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 H3BP45 60 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 K7ERQ8 282 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 TCF21O43680 179 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 PDCD6O75340 191 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 PSIP1O75475 530 aaKnown RBP1.66□□□□□ -2.14
SMAD4-207ENST00000589076 POP7O75817 140 aaKnown RBP1.66□□□□□ -2.14
SMAD4-207ENST00000589076 CBR3O75828 277 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 CPSF4O95639 269 aaKnown RBP1.66□□□□□ -2.14
SMAD4-207ENST00000589076 CA2P00918 260 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 IGKV1D-33P01593 117 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 IGKV1-33P01594 117 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 IGHMP01871 453 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 SPAM1P38567 509 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 PLTPP55058 493 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 SLC9A3R2Q15599 337 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 FAM162BQ5T6X4 162 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 AHSA2Q719I0 299 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 C10orf107Q8IVU9 208 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF738Q8NE65 137 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 OR5P2Q8WZ92 322 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 PKMYT1Q99640 499 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 GABARAPL1Q9H0R8 117 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 DSN1Q9H410 356 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 CHMP5Q9NZZ3 219 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 MCTS1Q9ULC4 181 aaKnown RBP1.66□□□□□ -2.14
SMAD4-207ENST00000589076 POFUT2Q9Y2G5 429 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 POLR3AO14802 1390 aaPredicted RBP1.66□□□□□ -2.14
SMAD4-207ENST00000589076 KIAA0232Q92628 1395 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 NUP153P49790 1475 aaKnown RBP1.66□□□□□ -2.14
SMAD4-207ENST00000589076 ATRQ13535 2644 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 LTBP2Q14767 1821 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 ATAD5Q96QE3 1844 aa1.66□□□□□ -2.14
SMAD4-207ENST00000589076 CEP170Q5SW79 1584 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 BOD1L1Q8NFC6 3051 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 TRAV8-2A0A0B4J237 113 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 A0A0B4J2C4 111 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 GOLGA8QA0A0J9YX86 632 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 GGTLC3B5MD39 225 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 SLC31A1O15431 190 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 FABP7O15540 132 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 SGCEO43556 437 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 SYNGR2O43760 224 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 PDYNP01213 254 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 UGT2B10P36537 528 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 RHOAP61586 193 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 PRDX1Q06830 199 aaKnown RBP1.65□□□□□ -2.15
SMAD4-207ENST00000589076 FLOT2Q14254 428 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 CASP8Q14790 479 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 ZNF141Q15928 474 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 LGALSLQ3ZCW2 172 aaPredicted RBP1.65□□□□□ -2.15
SMAD4-207ENST00000589076 WDR59Q6PJI9 974 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 COPS6Q7L5N1 327 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 TCAIMQ8N3R3 496 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 SLC25A45Q8N413 288 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 EIF4E3Q8N5X7 224 aaKnown RBP1.65□□□□□ -2.15
SMAD4-207ENST00000589076 ZIC4Q8N9L1 334 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 FAM45AQ8TCE6 357 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 SERPINB11Q96P15 392 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 ZNF586Q9NXT0 402 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 ZNF230Q9UIE0 474 aaPredicted RBP1.65□□□□□ -2.15
SMAD4-207ENST00000589076 NAGKQ9UJ70 344 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 ZNF443Q9Y2A4 671 aaPredicted RBP1.65□□□□□ -2.15
SMAD4-207ENST00000589076 DNMT1P26358 1616 aaKnown RBP1.65□□□□□ -2.15
SMAD4-207ENST00000589076 ABCB11O95342 1321 aa1.65□□□□□ -2.15
SMAD4-207ENST00000589076 IGHV1-45A0A0A0MS14 117 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 A0A1B0GX12 115 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 PSCAO43653 123 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 SNAP29O95721 258 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 CGB3P0DN86 165 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 CGB7P0DN87 165 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 GABRA1P14867 456 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 CRABP2P29373 138 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 PYCR1P32322 319 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 AQP5P55064 265 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 MEF2BQ02080 365 aaPredicted RBP1.64□□□□□ -2.15
SMAD4-207ENST00000589076 TPBGQ13641 420 aa1.64□□□□□ -2.15
SMAD4-207ENST00000589076 MMDQ15546 238 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms