RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RNF152Q8N8N0 203 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 Q8NFD4 153 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 OR51A4Q8NGJ6 313 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 OR13A1Q8NGR1 328 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 CNIH3Q8TBE1 160 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 ING3Q9NXR8 418 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 KIF25Q9UIL4 384 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 SIRT4Q9Y6E7 314 aaPredicted RBP11.02□□□□□ -0.65
VMP1-209ENST00000588915 TRAV24A0A0B4J272 114 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 SULT1B1O43704 296 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 GAPDHP04406 335 aaKnown RBP11.01□□□□□ -0.65
VMP1-209ENST00000588915 HCKP08631 526 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 GZMHP20718 246 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 GLP1RP43220 463 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 CDX1P47902 265 aaPredicted RBP11.01□□□□□ -0.65
VMP1-209ENST00000588915 MRPL28Q13084 256 aaKnown RBP11.01□□□□□ -0.65
VMP1-209ENST00000588915 HNF4GQ14541 408 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 LINC00311Q8N616 119 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 OR52M1Q8NGK5 317 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 OR10X1Q8NGY0 326 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 OR10AC1Q8NH08 325 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 OR8U1Q8NH10 309 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 RNFT2Q96EX2 444 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 PELI1Q96FA3 418 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 RAX2Q96IS3 184 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 ABCG5Q9H222 651 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 DCLRE1BQ9H816 532 aa11.01□□□□□ -0.65
VMP1-209ENST00000588915 LIN7CQ9NUP9 197 aaKnown RBP11.01□□□□□ -0.65
VMP1-209ENST00000588915 SNTNA6NMZ2 147 aa11□□□□□ -0.65
VMP1-209ENST00000588915 C3orf84H3BNL1 204 aa11□□□□□ -0.65
VMP1-209ENST00000588915 CCRL2O00421 344 aa11□□□□□ -0.65
VMP1-209ENST00000588915 MPZL2O60487 215 aa11□□□□□ -0.65
VMP1-209ENST00000588915 ELANEP08246 267 aa11□□□□□ -0.65
VMP1-209ENST00000588915 SNRPGP62308 76 aaKnown RBP11□□□□□ -0.65
VMP1-209ENST00000588915 FOXE3Q13461 319 aa11□□□□□ -0.65
VMP1-209ENST00000588915 DIAPH2-AS1Q14236 149 aa11□□□□□ -0.65
VMP1-209ENST00000588915 ZNF691Q5VV52 312 aa11□□□□□ -0.65
VMP1-209ENST00000588915 RSBN1Q5VWQ0 802 aaPredicted RBP11□□□□□ -0.65
VMP1-209ENST00000588915 ASCL4Q6XD76 172 aa11□□□□□ -0.65
VMP1-209ENST00000588915 AMIGO2Q86SJ2 522 aa11□□□□□ -0.65
VMP1-209ENST00000588915 IZUMO1Q8IYV9 350 aa11□□□□□ -0.65
VMP1-209ENST00000588915 SYS1Q8N2H4 156 aa11□□□□□ -0.65
VMP1-209ENST00000588915 C8orf31Q8N9H6 132 aa11□□□□□ -0.65
VMP1-209ENST00000588915 OR5M8Q8NGP6 311 aa11□□□□□ -0.65
VMP1-209ENST00000588915 OR2T10Q8NGZ9 312 aa11□□□□□ -0.65
VMP1-209ENST00000588915 TFAP2CQ92754 450 aa11□□□□□ -0.65
VMP1-209ENST00000588915 CENPNQ96H22 339 aaPredicted RBP11□□□□□ -0.65
VMP1-209ENST00000588915 EAF1Q96JC9 268 aaPredicted RBP11□□□□□ -0.65
VMP1-209ENST00000588915 IFT22Q9H7X7 185 aa11□□□□□ -0.65
VMP1-209ENST00000588915 FAM118AQ9NWS6 357 aa11□□□□□ -0.65
VMP1-209ENST00000588915 IMPAD1Q9NX62 359 aa11□□□□□ -0.65
VMP1-209ENST00000588915 LINC00527Q9UJ94 153 aa11□□□□□ -0.65
VMP1-209ENST00000588915 EXOGQ9Y2C4 368 aaKnown RBP11□□□□□ -0.65
VMP1-209ENST00000588915 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 J3QLW9 94 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 HSD17B6O14756 317 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 ZNF19P17023 458 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 GPR12P47775 334 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 GPR50Q13585 617 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 Q3ZCU0 254 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 KLHL22Q53GT1 634 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 CXorf66Q5JRM2 361 aaPredicted RBP10.99□□□□□ -0.65
VMP1-209ENST00000588915 Q8N6K4 173 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 OR8H1Q8NGG4 311 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 RFESDQ8TAC1 157 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 MRGPRDQ8TDS7 321 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 LEAP2Q969E1 77 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 C4orf36Q96KX1 117 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 CHCHD6Q9BRQ6 235 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
VMP1-209ENST00000588915 TMEM212A6NML5 194 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 NCBP2LA6PVI3 153 aaKnown RBP10.98□□□□□ -0.65
VMP1-209ENST00000588915 HSPB6O14558 160 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 MAGEB3O15480 346 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 RRP9O43818 475 aaKnown RBP10.98□□□□□ -0.65
VMP1-209ENST00000588915 IGHV3-7P01780 117 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 RPLP1P05386 114 aaKnown RBP10.98□□□□□ -0.65
VMP1-209ENST00000588915 RAB3AP20336 220 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 CD1BP29016 333 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 GALEQ14376 348 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 ZNF529Q6P280 563 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 MOB3BQ86TA1 216 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 Q8N9W7 124 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 PLPPR1Q8TBJ4 325 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 NR1H4Q96RI1 486 aaPredicted RBP10.98□□□□□ -0.65
VMP1-209ENST00000588915 OAZ3Q9UMX2 235 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 DHDHQ9UQ10 334 aa10.98□□□□□ -0.65
VMP1-209ENST00000588915 LINC01548A6NM66 108 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 IL3RAP26951 378 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 CHATP28329 748 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 SSTR5P35346 364 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 GNG10P50151 68 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 RASSF2P50749 326 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 INSL3P51460 131 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 RSU1Q15404 277 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 NHLRC3Q5JS37 347 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 LCNL1Q6ZST4 164 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 OR5AK2Q8NH90 309 aa10.97□□□□□ -0.65
VMP1-209ENST00000588915 GPER1Q99527 375 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms