RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 HTR1AP08908 422 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 DBTP11182 482 aaKnown RBP14.45□□□□□ -0.1
CCDC43-204ENST00000588687 GPR12P47775 334 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 GNG10P50151 68 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 SLC35B1P78383 322 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 CFHR3Q02985 330 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 BNIP1Q12981 228 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 HNF4GQ14541 408 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 PAN3Q58A45 887 aaKnown RBP14.45□□□□□ -0.1
CCDC43-204ENST00000588687 LCNL1Q6ZST4 164 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 PARP16Q8N5Y8 322 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 Q8NFD4 153 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 HAVCR2Q8TDQ0 301 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 MRGPRDQ8TDS7 321 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 C4orf36Q96KX1 117 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 OAZ3Q9UMX2 235 aa14.45□□□□□ -0.1
CCDC43-204ENST00000588687 TENM2Q9NT68 2774 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 OCM2P0CE71 109 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 OCMP0CE72 109 aaPredicted RBP14.44□□□□□ -0.1
CCDC43-204ENST00000588687 TMEM225BP0DP42 221 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 ALKBH1Q13686 389 aaKnown RBP14.44□□□□□ -0.1
CCDC43-204ENST00000588687 IL13RA2Q14627 380 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 SLC25A30Q5SVS4 291 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 ZNF691Q5VV52 312 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 ZNF529Q6P280 563 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 UNQ9370/PRO34162Q6UXP9 181 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 TGIF2LXQ8IUE1 241 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 FOXRED2Q8IWF2 684 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 ZNF565Q8N9K5 539 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 Q8N9W7 124 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 TMEM104Q8NE00 496 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 PXT1Q8NFP0 134 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 OR10A7Q8NGE5 316 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 RFESDQ8TAC1 157 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 RNFT2Q96EX2 444 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 EAF1Q96JC9 268 aaPredicted RBP14.44□□□□□ -0.1
CCDC43-204ENST00000588687 PRR25Q96S07 402 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 ABCG5Q9H222 651 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 DCLRE1BQ9H816 532 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 AP4S1Q9Y587 144 aa14.44□□□□□ -0.1
CCDC43-204ENST00000588687 IGHV1-3A0A0C4DH29 117 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 A0A1W2PPE3 182 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 DAPL1A0PJW8 107 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 AP4M1O00189 453 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 GABRPO00591 440 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 ZFPL1O95159 310 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 C21orf33P30042 268 aaPredicted RBP14.43□□□□□ -0.1
CCDC43-204ENST00000588687 GP2P55259 537 aaKnown RBP14.43□□□□□ -0.1
CCDC43-204ENST00000588687 FHL3Q13643 280 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 ZSCAN26Q16670 478 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 LTC4SQ16873 150 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 PIGYQ3MUY2 71 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 TEX38Q6PEX7 206 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 SLC16A12Q6ZSM3 486 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 PLSCR3Q9NRY6 295 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 LIN7CQ9NUP9 197 aaKnown RBP14.43□□□□□ -0.1
CCDC43-204ENST00000588687 ZMAT5Q9UDW3 170 aaKnown RBP14.43□□□□□ -0.1
CCDC43-204ENST00000588687 SCOCQ9UIL1 159 aa14.43□□□□□ -0.1
CCDC43-204ENST00000588687 BIRC6Q9NR09 4857 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 IGHV3-72A0A0B4J1Y9 119 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 TRAV39A0A0B4J263 110 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 HCKP08631 526 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 REG1BP48304 166 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 LPCAT4Q643R3 524 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 OR51A2Q8NGJ7 313 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 OR10X1Q8NGY0 326 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 OR8U1Q8NH10 309 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 TRUB1Q8WWH5 349 aaKnown RBP14.42□□□□□ -0.1
CCDC43-204ENST00000588687 ST6GALNAC6Q969X2 333 aa14.42□□□□□ -0.1
CCDC43-204ENST00000588687 EXOGQ9Y2C4 368 aaKnown RBP14.42□□□□□ -0.1
CCDC43-204ENST00000588687 C15orf65H3BRN8 121 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 J3QLW9 94 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 ZNF19P17023 458 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 CDX1P47902 265 aaPredicted RBP14.41□□□□□ -0.1
CCDC43-204ENST00000588687 KCNJ3P48549 501 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 RAB25P57735 213 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 SNRPGP62308 76 aaKnown RBP14.41□□□□□ -0.1
CCDC43-204ENST00000588687 FOXE3Q13461 319 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 KIR2DS1Q14954 304 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 PNLIPRP3Q17RR3 467 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 FAM53AQ6NSI3 398 aaPredicted RBP14.41□□□□□ -0.1
CCDC43-204ENST00000588687 ASCL4Q6XD76 172 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 SERPINA12Q8IW75 414 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 LINC00311Q8N616 119 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 ACBD7Q8N6N7 88 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 OR5D14Q8NGL3 314 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 MYOZ3Q8TDC0 251 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 RGP1Q92546 391 aaPredicted RBP14.41□□□□□ -0.1
CCDC43-204ENST00000588687 LGALS12Q96DT0 336 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 NR1H4Q96RI1 486 aaPredicted RBP14.41□□□□□ -0.1
CCDC43-204ENST00000588687 HSPB9Q9BQS6 159 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 BARHL1Q9BZE3 327 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 IFT22Q9H7X7 185 aa14.41□□□□□ -0.1
CCDC43-204ENST00000588687 ISG20L2Q9H9L3 353 aaKnown RBP14.41□□□□□ -0.1
CCDC43-204ENST00000588687 E9PI62 339 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 CCRL2O00421 344 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 FCGR1AP12314 374 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 GPR50Q13585 617 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 C9orf66Q5T8R8 295 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 SYS1Q8N2H4 156 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 410.8 ms