RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 PAX5Q02548 391 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 PRB3Q04118 309 aaPredicted RBP8.8□□□□□ -1
SMARCA4-213ENST00000587988 MEF2CQ06413 473 aaPredicted RBP8.8□□□□□ -1
SMARCA4-213ENST00000587988 DYNC1I2Q13409 638 aaKnown RBP8.8□□□□□ -1
SMARCA4-213ENST00000587988 CR1LQ2VPA4 569 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 UBE2NLQ5JXB2 153 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 Q6ZPA2 131 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 C5orf24Q7Z6I8 188 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 IZUMO1Q8IYV9 350 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 C11orf42Q8N5U0 333 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 Q8N7P7 452 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 OR4M2Q8NGB6 313 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 OR4K15Q8NH41 348 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 ACOT12Q8WYK0 555 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 HDHD3Q9BSH5 251 aaPredicted RBP8.8□□□□□ -1
SMARCA4-213ENST00000587988 SLIRPQ9GZT3 109 aaKnown RBP8.8□□□□□ -1
SMARCA4-213ENST00000587988 SIRPDQ9H106 197 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 ABCG5Q9H222 651 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 AK3Q9UIJ7 227 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 LINC00312Q9Y6C7 94 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 ZANQ9Y493 2812 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 TMEM30CPA0ZSE6 113 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 FUOMA2VDF0 154 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 H3BUI4 141 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 MFNGO00587 321 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 CGB3P0DN86 165 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 CGB7P0DN87 165 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 HIST1H1DP16402 221 aaKnown RBP8.79□□□□□ -1
SMARCA4-213ENST00000587988 ELK1P19419 428 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 GATA3P23771 443 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 FAM189A2Q15884 450 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 C17orf58Q2M2W7 97 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 ZNF260Q3ZCT1 412 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 CDNFQ49AH0 187 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 MZT2AQ6P582 158 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 TRAPPC6BQ86SZ2 158 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 GAPTQ8N292 157 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 MRPL30Q8TCC3 161 aaKnown RBP8.79□□□□□ -1
SMARCA4-213ENST00000587988 MRGPRDQ8TDS7 321 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 AP3S1Q92572 193 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 CORO2AQ92828 525 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 DMRTB1Q96MA1 342 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 WDFY2Q96P53 400 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 TBX15Q96SF7 602 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 NXF2Q9GZY0 626 aaKnown RBP8.79□□□□□ -1
SMARCA4-213ENST00000587988 MIXL1Q9H2W2 232 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 NCOR1P1Q9H4R4 102 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 AUP1Q9Y679 476 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 SVEP1Q4LDE5 3571 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 MAST4O15021 2626 aa8.79□□□□□ -1
SMARCA4-213ENST00000587988 TRAV18A0A075B6X5 111 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 TRGV10A0A0A0MS01 117 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 TMEM235A6NFC5 223 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 C17orf98A8MV24 154 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 J3QLI3 93 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 M0R1W7 72 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 CA11O75493 328 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 MMP23AO75900 390 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 TOX4O94842 621 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 APOA1P02647 267 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 ZNF728P0DKX0 622 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 PTHLHP12272 177 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 RCC1P18754 421 aaPredicted RBP8.78□□□□□ -1
SMARCA4-213ENST00000587988 GDNFP39905 211 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 GLP1RP43220 463 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 MADCAM1Q13477 382 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 BAIAP2L2Q6UXY1 529 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 IL17RELQ6ZVW7 336 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 VMO1Q7Z5L0 202 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 LAX1Q8IWV1 398 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 KIR3DL3Q8N743 410 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 UBALD1Q8TB05 177 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 S100A16Q96FQ6 103 aaKnown RBP8.78□□□□□ -1
SMARCA4-213ENST00000587988 CMTM3Q96MX0 182 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 ZNF714Q96N38 554 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 CMSS1Q9BQ75 279 aaKnown RBP8.78□□□□□ -1
SMARCA4-213ENST00000587988 PCGF1Q9BSM1 259 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 DIABLOQ9NR28 239 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 SIRT7Q9NRC8 400 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 OR6C3Q9NZP0 311 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 LPAR3Q9UBY5 353 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 TRAPPC2LQ9UL33 140 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 UBE2J1Q9Y385 318 aaPredicted RBP8.78□□□□□ -1
SMARCA4-213ENST00000587988 KPTNQ9Y664 436 aa8.78□□□□□ -1
SMARCA4-213ENST00000587988 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV3OR16-10A0A075B7F0 116 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A0A6YYH2 397 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 A6NJ64 397 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 FAM25AB3EWG3 89 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 FAM25CB3EWG5 89 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 FAM25GB3EWG6 89 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 INAFM1C9JVW0 142 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 RGS5O15539 181 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 XRCC3O43542 346 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 SCGNO76038 276 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 NAPSAO96009 420 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 OMGP23515 440 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 SSTR5P35346 364 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 KLRD1Q13241 179 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 KLF17Q5JT82 389 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms