RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 CABLES2Q9BTV7 478 aa18.8■□□□□ 0.6
CIRBP-208ENST00000586548 NMES1Q9C002 83 aa18.8■□□□□ 0.6
CIRBP-208ENST00000586548 NAA60Q9H7X0 242 aa18.8■□□□□ 0.6
CIRBP-208ENST00000586548 SLC2A9Q9NRM0 540 aa18.8■□□□□ 0.6
CIRBP-208ENST00000586548 PCDHB10Q9UN67 800 aa18.8■□□□□ 0.6
CIRBP-208ENST00000586548 KCNIP3Q9Y2W7 256 aa18.8■□□□□ 0.6
CIRBP-208ENST00000586548 IGKV1-6A0A0C4DH72 117 aa18.79■□□□□ 0.6
CIRBP-208ENST00000586548 RCC1P18754 421 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-208ENST00000586548 ST6GALNAC3Q8NDV1 305 aa18.79■□□□□ 0.6
CIRBP-208ENST00000586548 RTN4IP1Q8WWV3 396 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-208ENST00000586548 PRR13Q9NZ81 148 aa18.79■□□□□ 0.6
CIRBP-208ENST00000586548 TLN1Q9Y490 2541 aaKnown RBP18.79■□□□□ 0.6
CIRBP-208ENST00000586548 C13orf42A0A1B0GVH6 325 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 THBDP07204 575 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 RPA2P15927 270 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 CFHR2P36980 270 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 CA7P43166 264 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 OPCMLQ14982 345 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 TMEM65Q6PI78 240 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 C5orf24Q7Z6I8 188 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 OR8H1Q8NGG4 311 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 LRRC29Q8WV35 223 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 MRPL37Q9BZE1 423 aaKnown RBP18.78■□□□□ 0.6
CIRBP-208ENST00000586548 TAAR3PQ9P1P4 343 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 CADP27708 2225 aa18.78■□□□□ 0.6
CIRBP-208ENST00000586548 IFNL4K9M1U5 179 aa18.77■□□□□ 0.6
CIRBP-208ENST00000586548 ADAP1O75689 374 aa18.77■□□□□ 0.6
CIRBP-208ENST00000586548 C11orf87Q6NUJ2 197 aa18.77■□□□□ 0.6
CIRBP-208ENST00000586548 PCSK4Q6UW60 755 aa18.77■□□□□ 0.6
CIRBP-208ENST00000586548 UNQ6494/PRO21346Q6UXR6 183 aa18.77■□□□□ 0.6
CIRBP-208ENST00000586548 FAM185AQ8N0U4 392 aa18.77■□□□□ 0.6
CIRBP-208ENST00000586548 ZCCHC14Q8WYQ9 949 aaKnown RBP18.77■□□□□ 0.6
CIRBP-208ENST00000586548 MRPL24Q96A35 216 aaKnown RBP18.77■□□□□ 0.6
CIRBP-208ENST00000586548 MEGF10Q96KG7 1140 aa18.77■□□□□ 0.6
CIRBP-208ENST00000586548 METTL8Q9H825 291 aaKnown RBP18.77■□□□□ 0.6
CIRBP-208ENST00000586548 CEBPDP49716 269 aaPredicted RBP18.77■□□□□ 0.59
CIRBP-208ENST00000586548 ATXN7L3Q14CW9 347 aaPredicted RBP18.77■□□□□ 0.59
CIRBP-208ENST00000586548 PHLDA2Q53GA4 152 aa18.77■□□□□ 0.59
CIRBP-208ENST00000586548 TEX261Q6UWH6 196 aa18.77■□□□□ 0.59
CIRBP-208ENST00000586548 OR2V2Q96R30 315 aa18.77■□□□□ 0.59
CIRBP-208ENST00000586548 VRK1Q99986 396 aaPredicted RBP18.77■□□□□ 0.59
CIRBP-208ENST00000586548 SUCNR1Q9BXA5 334 aa18.77■□□□□ 0.59
CIRBP-208ENST00000586548 MBNL3Q9NUK0 354 aaKnown RBP18.77■□□□□ 0.59
CIRBP-208ENST00000586548 WIPI2Q9Y4P8 454 aa18.77■□□□□ 0.59
CIRBP-208ENST00000586548 U3KQ87 197 aa18.77■□□□□ 0.59
CIRBP-208ENST00000586548 CHD3Q12873 2000 aaKnown RBP18.76■□□□□ 0.59
CIRBP-208ENST00000586548 TRBV6-7A0A0A0MS04 114 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 DPRXA6NFQ7 191 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 NPIPB11E5RHQ5 1161 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 MPC2O95563 127 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 S100A11P31949 105 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 KCNJ3P48549 501 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 ZNF546Q86UE3 836 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 FAM90A1Q86YD7 464 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 TRAPPC2LQ9UL33 140 aa18.76■□□□□ 0.59
CIRBP-208ENST00000586548 TMEM30CPA0ZSE6 113 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 SRRM5B3KS81 715 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 PSPNO60542 156 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 RND3P61587 244 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 TMEM187Q14656 261 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 LRRC37A5PQ49AS3 106 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 TMUB2Q71RG4 321 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 ZNF565Q8N9K5 539 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 OR10J5Q8NHC4 309 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 MFFQ9GZY8 342 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 RDH8Q9NYR8 311 aa18.75■□□□□ 0.59
CIRBP-208ENST00000586548 ABCD4O14678 606 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 OR5AC1P0C628 307 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 ASCL1P50553 236 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 SLC35E4Q6ICL7 350 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 H1FOOQ8IZA3 346 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-208ENST00000586548 OR11L1Q8NGX0 322 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 THAP6Q8TBB0 222 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 SECTM1Q8WVN6 248 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 C2orf50Q96LR7 162 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 SEBOXQ9HB31 216 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-208ENST00000586548 SPRY3O43610 288 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 HOXB5P09067 269 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 PSMB6P28072 239 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 GNRHRP30968 328 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 GATA4P43694 442 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 BSPH1Q075Z2 132 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 HMGN3Q15651 99 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 ZNF680Q8NEM1 530 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 KIRREL1Q96J84 757 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 SLC5A7Q9GZV3 580 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 PRORYQ9H606 182 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 NGBQ9NPG2 151 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 TNFSF18Q9UNG2 199 aa18.74■□□□□ 0.59
CIRBP-208ENST00000586548 IGKV1D-13A0A0B4J2D9 117 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 GPR31O00270 319 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 IGKV1-13P0DP09 117 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 HOXA4Q00056 320 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-208ENST00000586548 LDLRAD3Q86YD5 345 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 SLC7A5P1Q8MH63 180 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 LRTM2Q8N967 370 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 ITLN1Q8WWA0 313 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 OR10C1Q96KK4 312 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 ARL6Q9H0F7 186 aa18.73■□□□□ 0.59
CIRBP-208ENST00000586548 ZDHHC8Q9ULC8 765 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms