RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 DPCDQ9BVM2 203 aaPredicted RBP9.98□□□□□ -0.81
SS18-225ENST00000585121 PPIL3Q9H2H8 161 aaKnown RBP9.98□□□□□ -0.81
SS18-225ENST00000585121 DUSP21Q9H596 190 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 KIF25Q9UIL4 384 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 CD1AP06126 327 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 SMIM18P0DKX4 95 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 GTF2F2P13984 249 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 IGFBP3P17936 291 aaPredicted RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 FSTP19883 344 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 MAPK3P27361 379 aaPredicted RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 MNDAP41218 407 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 RPL5P46777 297 aaKnown RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 RBM11P57052 281 aaKnown RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 RBM39Q14498 530 aaKnown RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 SLC22A6Q4U2R8 563 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 LDLRAD2Q5SZI1 272 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 CCDC144NLQ6NUI1 221 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 CDH26Q8IXH8 852 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 KLHDC1Q8N7A1 406 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 SUMF2Q8NBJ7 301 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 NEK7Q8TDX7 302 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 MYDGFQ969H8 173 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 ORAI1Q96D31 301 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 OR14A2Q96R54 314 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 IFT22Q9H7X7 185 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 CALYQ9NYX4 217 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 FOXJ3Q9UPW0 622 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 AMMECR1Q9Y4X0 333 aaPredicted RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 TRBV5-7A0A0A0MS05 114 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 A0A1W2PPK0 400 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 FAM172BPA6NC97 362 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 A6NHS1 94 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 TFAP2AP05549 437 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 CSF1P09603 554 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 VSIG10L2P0DP72 767 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 RPS11P62280 158 aaKnown RBP eCLIP9.97□□□□□ -0.81
SS18-225ENST00000585121 SLC35A2P78381 396 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 PAX5Q02548 391 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 DOC2BQ14184 412 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 C17orf58Q2M2W7 97 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 MPV17LQ2QL34 196 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 HLA-DRB5Q30154 266 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 ATAD3CQ5T2N8 411 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 CCBE1Q6UXH8 406 aaPredicted RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 BAIAP2L2Q6UXY1 529 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 C16orf82Q7Z2V1 217 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 NANOGP1Q8N7R0 232 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 OR13A1Q8NGR1 328 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 MND1Q9BWT6 205 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 ZNF286AQ9HBT8 521 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 SPACA1Q9HBV2 294 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 IDI2-AS1Q9NZ38 188 aa9.97□□□□□ -0.81
SS18-225ENST00000585121 MRPS28Q9Y2Q9 187 aaKnown RBP9.97□□□□□ -0.81
SS18-225ENST00000585121 KIAA2026Q5HYC2 2103 aa9.96□□□□□ -0.81
SS18-225ENST00000585121 DSCAML1Q8TD84 2053 aa9.96□□□□□ -0.81
SS18-225ENST00000585121 WNK1Q9H4A3 2382 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 A0A087X0M5 115 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 A0A1B0GX30 115 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 TMEM30CPA0ZSE6 113 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 OOSP1A8MZH6 123 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 PTGES3LE9PB15 166 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 BUB1B-PAK6H3BSN5 160 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 GEMIN2O14893 280 aaKnown RBP9.96□□□□□ -0.82
SS18-225ENST00000585121 IL1AP01583 271 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 IGLV1-47P01700 117 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 MAS1P04201 325 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 GZMHP20718 246 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 GDNFP39905 211 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 TPTE2P1Q5T6R2 138 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 RSBN1Q5VWQ0 802 aaPredicted RBP9.96□□□□□ -0.82
SS18-225ENST00000585121 RNLSQ5VYX0 342 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 ZNF773Q6PK81 442 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 GLIPR1L1Q6UWM5 242 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 MS4A15Q8N5U1 240 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 OR10A7Q8NGE5 316 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 PLPPR1Q8TBJ4 325 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 MRGPRDQ8TDS7 321 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 MUL1Q969V5 352 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 MRPS24Q96EL2 167 aaKnown RBP9.96□□□□□ -0.82
SS18-225ENST00000585121 KIRREL1Q96J84 757 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 MMP28Q9H239 520 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 ZNF702PQ9H963 129 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 FKBP14Q9NWM8 211 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 NDUFA13Q9P0J0 144 aa9.96□□□□□ -0.82
SS18-225ENST00000585121 TRAV8-7A0A075B6U6 113 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 MEGF11A6BM72 1044 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 FAM90A22PA8MWA6 464 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 CDK1P06493 297 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 CGB3P0DN86 165 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 CGB7P0DN87 165 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 VDAC2P45880 294 aaPredicted RBP9.95□□□□□ -0.82
SS18-225ENST00000585121 LTC4SQ16873 150 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 AWAT2Q6E213 333 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 SLC16A12Q6ZSM3 486 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 Q8N2B8 174 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 NKAIN3Q8N8D7 197 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 RFESDQ8TAC1 157 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 FAM110DQ8TAY7 271 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms