RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	OR3A1	P47881	315 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	BCAP31	P51572	246 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	SNRPD2	P62316	118 aa	Known RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	MRPS15	P82914	257 aa	Known RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	RBM39	Q14498	530 aa	Known RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	MEF2D	Q14814	521 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	CARTPT	Q16568	116 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	FAM209A	Q5JX71	171 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	C11orf71	Q6IPW1	123 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	PLET1	Q6UQ28	207 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	IDO2	Q6ZQW0	420 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	C17orf107	Q6ZR85	190 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	BTN2A1	Q7KYR7	527 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	FAM90A1	Q86YD7	464 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	CADM3	Q8N126	398 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	LILRB2	Q8N423	598 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	DEFB108B	Q8NET1	73 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	OR13C8	Q8NGS7	320 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	OR5H2	Q8NGV7	314 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	ANGPTL6	Q8NI99	470 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	MRPL30	Q8TCC3	161 aa	Known RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	CCDC107	Q8WV48	283 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	ERGIC1	Q969X5	290 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	MRGPRF	Q96AM1	343 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	VRK1	Q99986	396 aa	Predicted RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	MARVELD1	Q9BSK0	173 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	BEX2	Q9BXY8	128 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	EGLN1	Q9GZT9	426 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	CHST6	Q9GZX3	395 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	C20orf85	Q9H1P6	137 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	MS4A5	Q9H3V2	200 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	UBTD1	Q9HAC8	227 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	SAP30L	Q9HAJ7	183 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	BEX1	Q9HBH7	125 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	TMEM165	Q9HC07	324 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.88	□□□□□ -1.63
MSI2-219	ENST00000584476		Q9N2K0	584 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	CBLN4	Q9NTU7	201 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	AP5S1	Q9NUS5	200 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	DNAJB11	Q9UBS4	358 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	DUX4	Q9UBX2	424 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNF222	Q9UK12	451 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	NUBP2	Q9Y5Y2	271 aa		4.88	□□□□□ -1.63
MSI2-219	ENST00000584476	TRBV23-1	A0A0A0MS06	115 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476		A1L4Q6	167 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	OOEP	A6NGQ2	149 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	DISC1	C4P0D8	188 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	TMEM178B	H3BS89	294 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	IFNL4	K9M1U5	179 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	LY6H	O94772	140 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	NDUFB6	O95139	128 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	CLDN1	O95832	211 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	GYPA	P02724	150 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	IFNA6	P05013	189 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	SCT	P09683	121 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	SELL	P14151	372 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	IRF2	P14316	349 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	RCC1	P18754	421 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ANXA7	P20073	488 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	COL8A2	P25067	703 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	OR3A3	P47888	321 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	PPOX	P50336	477 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	TAS2R46	P59540	309 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ARPC4	P59998	168 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	AES	Q08117	197 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	TATDN3	Q17R31	274 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	CHRFAM7A	Q494W8	412 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	SCGB2B2	Q4G0G5	96 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ACTBL2	Q562R1	376 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	IGSF11	Q5DX21	431 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	VAX1	Q5SQQ9	334 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	AGAP6	Q5VW22	663 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	SHE	Q5VZ18	495 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	TEX36	Q5VZQ5	186 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	STUM	Q69YW2	141 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNF880	Q6PDB4	577 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNF497	Q6ZNH5	498 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	DTX2	Q86UW9	622 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	GAPT	Q8N292	157 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	FGFRL1	Q8N441	504 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	TPRX1	Q8N7U7	411 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ASCC1	Q8N9N2	400 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNRF1	Q8ND25	227 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	OR5AP2	Q8NGF4	316 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	DEDD2	Q8WXF8	326 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	CCL17	Q92583	94 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	CREB3L1	Q96BA8	519 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	COQ2	Q96H96	371 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	GAFA1	Q96PS6	74 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	CCL13	Q99616	98 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	GINS4	Q9BRT9	223 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	DCTN5	Q9BTE1	182 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	KRTAP4-5	Q9BYR2	181 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	SHARPIN	Q9H0F6	387 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	LIME1	Q9H400	295 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNF286A	Q9HBT8	521 aa		4.87	□□□□□ -1.63
MSI2-219	ENST00000584476	TMEM106B	Q9NUM4	274 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms