RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 OR2T6Q8NHC8 308 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 NEK7Q8TDX7 302 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 TMED9Q9BVK6 235 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 RANBP3Q9H6Z4 567 aaPredicted RBP16.47■□□□□ 0.23
SS18-224ENST00000584083 IFT22Q9H7X7 185 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 CALYQ9NYX4 217 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 A6NDX4 124 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 TIMM23O14925 209 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 CD34P28906 385 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 DYNLT3P51808 116 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 SLC35A2P78381 396 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 ACSM3Q53FZ2 586 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 AWAT2Q6E213 333 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 CCBE1Q6UXH8 406 aaPredicted RBP16.46■□□□□ 0.23
SS18-224ENST00000584083 TREML4Q6UXN2 200 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 DTX3Q8N9I9 347 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 MRGPRDQ8TDS7 321 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 PKD1L1Q8TDX9 2849 aa16.46■□□□□ 0.23
SS18-224ENST00000584083 MGAM2Q2M2H8 2515 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 TRAV39A0A0B4J263 110 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 MEGF11A6BM72 1044 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 LEUTXA8MZ59 168 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 H3BUI4 141 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 IGLV1-47P01700 117 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 CGB3P0DN86 165 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 CGB7P0DN87 165 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 CEACAM3P40198 252 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 PAX5Q02548 391 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 RBM39Q14498 530 aaKnown RBP16.45■□□□□ 0.22
SS18-224ENST00000584083 INSL4Q14641 139 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 LTC4SQ16873 150 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 IZUMO2Q6UXV1 221 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 NKAIN3Q8N8D7 197 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 CREB3L1Q96BA8 519 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 MRPS24Q96EL2 167 aaKnown RBP16.45■□□□□ 0.22
SS18-224ENST00000584083 KIRREL1Q96J84 757 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 ANKRD60Q9BZ19 345 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 IDI2-AS1Q9NZ38 188 aa16.45■□□□□ 0.22
SS18-224ENST00000584083 LSM2Q9Y333 95 aaKnown RBP16.45■□□□□ 0.22
SS18-224ENST00000584083 A0A087X0M5 115 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 A0A1B0GX30 115 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 TMEM30CPA0ZSE6 113 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 M0QZ24 198 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 IL1AP01583 271 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 HSPA13P48723 471 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 ARHGDIBP52566 201 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 IRF3Q14653 427 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 RFESDQ8TAC1 157 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 CCDC90BQ9GZT6 254 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 BANF2Q9H503 90 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 DUSP21Q9H596 190 aa16.44■□□□□ 0.22
SS18-224ENST00000584083 BUB1B-PAK6H3BSN5 160 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 RGS10O43665 173 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 IGHV3-7P01780 117 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 BRS3P32247 399 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 EFNB2P52799 333 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 HLA-DRB5Q30154 266 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 UTF1Q5T230 341 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 FAM27D1Q5T7N8 215 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 C11orf88Q6PI97 169 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 UNQ9370/PRO34162Q6UXP9 181 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 OR9G1Q8NH87 305 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 UFD1Q92890 307 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 LEAP2Q969E1 77 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 UQCC2Q9BRT2 126 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 SELENOIQ9C0D9 397 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 SPACA1Q9HBV2 294 aa16.43■□□□□ 0.22
SS18-224ENST00000584083 TET2Q6N021 2002 aaPredicted RBP16.42■□□□□ 0.22
SS18-224ENST00000584083 MCRIP1C9JLW8 97 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 CRTAPO75718 401 aaPredicted RBP16.42■□□□□ 0.22
SS18-224ENST00000584083 HSMCR30P0CW71 290 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 GZMHP20718 246 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 SSTR5P35346 364 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 GPR50Q13585 617 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 RBM48Q5RL73 367 aaKnown RBP16.42■□□□□ 0.22
SS18-224ENST00000584083 TPTE2P1Q5T6R2 138 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 LIPKQ5VXJ0 399 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 CEACAM19Q7Z692 300 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 CCDC107Q8WV48 283 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 CNBD2Q96M20 576 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 PRSS22Q9GZN4 317 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 LINC00574Q9H8X3 128 aa16.42■□□□□ 0.22
SS18-224ENST00000584083 FAM90A22PA8MWA6 464 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 NPIPB11E5RHQ5 1161 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 VSIG10L2P0DP72 767 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 MGMTP16455 207 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 CD24P25063 80 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 ARSJQ5FYB0 599 aaPredicted RBP16.41■□□□□ 0.22
SS18-224ENST00000584083 RAB12Q6IQ22 244 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 Q6ZTK2 550 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 LYPD6Q86Y78 171 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 KLHDC1Q8N7A1 406 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 TMEM104Q8NE00 496 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 OR10A7Q8NGE5 316 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 TMEM203Q969S6 136 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 MMP28Q9H239 520 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 ZNF702PQ9H963 129 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 AMMECR1Q9Y4X0 333 aaPredicted RBP16.41■□□□□ 0.22
SS18-224ENST00000584083 PEX16Q9Y5Y5 336 aa16.41■□□□□ 0.22
SS18-224ENST00000584083 WNK1Q9H4A3 2382 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms