RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 LDLRAD4O15165 306 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 QRFPP83859 136 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 HERPUD1Q15011 391 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 RSU1Q15404 277 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 OR10K2Q6IF99 312 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 ASCL4Q6XD76 172 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 SLC36A1Q7Z2H8 476 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 MKXQ8IYA7 352 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 OR5R1Q8NH85 324 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 KCNG3Q8TAE7 436 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 PPP1R35Q8TAP8 253 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 S100ZQ8WXG8 99 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 FAM46BQ96A09 425 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 PTX4Q96A99 478 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 DMRTB1Q96MA1 342 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 DNAH3Q8TD57 4116 aa16.68■□□□□ 0.26
SRSF1-206ENST00000583741 MEIOCA2RUB1 952 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 TMEM14DPA8MWL7 114 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 NDUFB3O43676 98 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 RAB6AP20340 208 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 SERPINA2P20848 420 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 MPZP25189 248 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 EFNB2P52799 333 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 IL24Q13007 206 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 PLA2G7Q13093 441 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 UNC119Q13432 240 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 GPR176Q14439 515 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 SPANXN2Q5MJ10 180 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 CNIH2Q6PI25 160 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 Q6ZTK2 550 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 CCDC190Q86UF4 302 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 SAXO1Q8IYX7 474 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 C11orf44Q8N8P7 122 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 OR5T2Q8NGG2 359 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 OR10K1Q8NGX5 313 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 C8orf46Q8TAG6 207 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 AKIP1Q9NQ31 210 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 RAB22AQ9UL26 194 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 IGKV1-12A0A0C4DH73 117 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 SYNGR1O43759 233 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 ZNF780AO75290 641 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-206ENST00000583741 CRTAPO75718 401 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-206ENST00000583741 IGKV1D-12P01611 117 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 TFF1P04155 84 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 TALDO1P37837 337 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 FAM189A2Q15884 450 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 STUMQ69YW2 141 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 C1orf122Q6ZSJ8 110 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 TMEM104Q8NE00 496 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 C17orf50Q8WW18 174 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 AQP3Q92482 292 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 H1FXQ92522 213 aaKnown RBP16.67■□□□□ 0.26
SRSF1-206ENST00000583741 SLAMF9Q96A28 289 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 ABCG5Q9H222 651 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 HMG20AQ9NP66 347 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 IL36GQ9NZH8 169 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 EXTL2Q9UBQ6 330 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 POLDIP2Q9Y2S7 368 aa16.67■□□□□ 0.26
SRSF1-206ENST00000583741 A0A1W2PP11 408 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 H3BUX3 64 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 CDIPTO14735 213 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 GPR37O15354 613 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 HTR3BO95264 441 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 MPIG6BO95866 241 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 CSTBP04080 98 aaKnown RBP16.66■□□□□ 0.26
SRSF1-206ENST00000583741 ETV6P41212 452 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 GMFBP60983 142 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 S100A16Q96FQ6 103 aaKnown RBP16.66■□□□□ 0.26
SRSF1-206ENST00000583741 TMEM59Q9BXS4 323 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 TLNRD1Q9H1K6 362 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 WDR13Q9H1Z4 485 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 BANF2Q9H503 90 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 PCDHB16Q9NRJ7 776 aa16.66■□□□□ 0.26
SRSF1-206ENST00000583741 KDM4BO94953 1096 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 MGMTP16455 207 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 UBE2E1P51965 193 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 LRRC10Q5BKY1 277 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 ATPAF1Q5TC12 328 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-206ENST00000583741 MFSD4AQ8N468 514 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 OR4M1Q8NGD0 313 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 CFHR4Q92496 578 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 ATG5Q9H1Y0 275 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 MTCH1Q9NZJ7 389 aa16.65■□□□□ 0.26
SRSF1-206ENST00000583741 METTL21EPA6NDL7 271 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 FABP12A6NFH5 140 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 RHBDL1O75783 438 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 NPBWR2P48146 333 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 ZNF45Q02386 682 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 BEND2Q8NDZ0 799 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 PHF21AQ96BD5 680 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 WDR12Q9GZL7 423 aaKnown RBP16.64■□□□□ 0.25
SRSF1-206ENST00000583741 V9GYH0 126 aa16.64■□□□□ 0.25
SRSF1-206ENST00000583741 RYR3Q15413 4870 aa16.63■□□□□ 0.25
SRSF1-206ENST00000583741 GTF2F2P13984 249 aa16.63■□□□□ 0.25
SRSF1-206ENST00000583741 BCL3P20749 454 aa16.63■□□□□ 0.25
SRSF1-206ENST00000583741 RPS27AP62979 156 aaKnown RBP16.63■□□□□ 0.25
SRSF1-206ENST00000583741 MADCAM1Q13477 382 aa16.63■□□□□ 0.25
SRSF1-206ENST00000583741 ZNF846Q147U1 533 aa16.63■□□□□ 0.25
SRSF1-206ENST00000583741 LY6EQ16553 131 aa16.63■□□□□ 0.25
SRSF1-206ENST00000583741 HCP5Q6MZN7 132 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms