RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	PYDC1	Q8WXC3	89 aa		11.97	□□□□□ -0.49
SREBF1-222	ENST00000583732	PDCD1LG2	Q9BQ51	273 aa		11.97	□□□□□ -0.49
SREBF1-222	ENST00000583732	EXOG	Q9Y2C4	368 aa	Known RBP	11.97	□□□□□ -0.49
SREBF1-222	ENST00000583732	IGHV3-72	A0A0B4J1Y9	119 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732		E9PI62	339 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	GABRP	O00591	440 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	CIB2	O75838	187 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	ZFPL1	O95159	310 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	REG1B	P48304	166 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	SOX2	P48431	317 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	SNRPG	P62308	76 aa	Known RBP	11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	OR51A2	Q8NGJ7	313 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	OR5D14	Q8NGL3	314 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	UBALD1	Q8TB05	177 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	MRPL48	Q96GC5	212 aa	Known RBP	11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	B9D2	Q9BPU9	175 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	BARHL1	Q9BZE3	327 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	ZNF581	Q9P0T4	197 aa		11.96	□□□□□ -0.49
SREBF1-222	ENST00000583732	HSD17B6	O14756	317 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	FGF16	O43320	207 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	HTR3B	O95264	441 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	ALPL	P05186	524 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	MYCNOS	P40205	109 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	RASSF2	P50749	326 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	RAB7A	P51149	207 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	SLC35B1	P78383	322 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	GALE	Q14376	348 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	IL13RA2	Q14627	380 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	RSU1	Q15404	277 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	MOB3B	Q86TA1	216 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	FOXRED2	Q8IWF2	684 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	OR8H3	Q8N146	312 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	PARP16	Q8N5Y8	322 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	OR5AK2	Q8NH90	309 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	HAVCR2	Q8TDQ0	301 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	TFAP2C	Q92754	450 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	MCRIP2	Q9BUT9	160 aa	Known RBP	11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	AMBN	Q9NP70	447 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	TAS2R4	Q9NYW5	299 aa		11.95	□□□□□ -0.5
SREBF1-222	ENST00000583732	LINC01548	A6NM66	108 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	TMEM212	A6NML5	194 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	SNTN	A6NMZ2	147 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	MAGEB3	O15480	346 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	RAB3A	P20336	220 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	SLC25A30	Q5SVS4	291 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	ELP2	Q6IA86	826 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	LCNL1	Q6ZST4	164 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	STPG2	Q8N412	459 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	PXT1	Q8NFP0	134 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	CPNE2	Q96FN4	548 aa	Predicted RBP	11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	ZFP57	Q9NU63	452 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	GMPPB	Q9Y5P6	360 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	RYR3	Q15413	4870 aa		11.94	□□□□□ -0.5
SREBF1-222	ENST00000583732	NCBP2L	A6PVI3	153 aa	Known RBP	11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	NPIPB11	E5RHQ5	1161 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	CCRL2	O00421	344 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	CDRT1	O95170	752 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	IGHG2	P01859	326 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	GBX2	P52951	348 aa	Predicted RBP	11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	DEFB136	Q30KP8	78 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	UNQ9370/PRO34162	Q6UXP9	181 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	ZNF695	Q8IW36	515 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	SYS1	Q8N2H4	156 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	SUMF2	Q8NBJ7	301 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	WWC2-AS2	Q96NR7	200 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	P2RX4	Q99571	388 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	DPCD	Q9BVM2	203 aa	Predicted RBP	11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	FAM118A	Q9NWS6	357 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	ERVK13-1	Q9NX77	482 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	ING4	Q9UNL4	249 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	NBEAL2	Q6ZNJ1	2754 aa		11.93	□□□□□ -0.5
SREBF1-222	ENST00000583732	IGHV3-43	A0A0B4J1X8	118 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	IGHV1-3	A0A0C4DH29	117 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732		H0YHG0	523 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	OR7C1	O76099	320 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	RPLP1	P05386	114 aa	Known RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	RPSA	P08865	295 aa	Known RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	IGHV3-43D	P0DP04	118 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	GABRB1	P18505	474 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	ALDH3A2	P51648	485 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	LUM	P51884	338 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	GTF2A1	P52655	376 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	DGCR2	P98153	550 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	CCDC107	Q8WV48	283 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	RGP1	Q92546	391 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	RBMXL1	Q96E39	390 aa	Known RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	RAX2	Q96IS3	184 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	EAF1	Q96JC9	268 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	JAM3	Q9BX67	310 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	NCOR1P1	Q9H4R4	102 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	LINC00574	Q9H8X3	128 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	ST3GAL6	Q9Y274	331 aa		11.92	□□□□□ -0.5
SREBF1-222	ENST00000583732	TMEM30CP	A0ZSE6	113 aa		11.91	□□□□□ -0.5
SREBF1-222	ENST00000583732	SDCBP	O00560	298 aa	Predicted RBP	11.91	□□□□□ -0.5
SREBF1-222	ENST00000583732	ATP5H	O75947	161 aa		11.91	□□□□□ -0.5
SREBF1-222	ENST00000583732	FADS2	O95864	444 aa	Known RBP	11.91	□□□□□ -0.5
SREBF1-222	ENST00000583732	GAPDH	P04406	335 aa	Known RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms