RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 ZNF774Q6NX45 483 aa11.73□□□□□ -0.53
GGA3-214ENST00000582717 ASCL4Q6XD76 172 aa11.73□□□□□ -0.53
GGA3-214ENST00000582717 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
GGA3-214ENST00000582717 HIPK2Q9H2X6 1198 aa11.73□□□□□ -0.53
GGA3-214ENST00000582717 MMP24Q9Y5R2 645 aa11.73□□□□□ -0.53
GGA3-214ENST00000582717 MYO7BQ6PIF6 2116 aa11.73□□□□□ -0.53
GGA3-214ENST00000582717 GPR37O15354 613 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 PHF1O43189 567 aaPredicted RBP11.72□□□□□ -0.53
GGA3-214ENST00000582717 CST2P09228 141 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 CLDN18P56856 261 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 SSTP61278 116 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 HERV-K104P61576 105 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 RND3P61587 244 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 CEACAM16Q2WEN9 425 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 ZNF506Q5JVG8 444 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 SLC22A25Q6T423 547 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 SLC35E3Q7Z769 313 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 IL22RA1Q8N6P7 574 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 RBMXL1Q96E39 390 aaKnown RBP11.72□□□□□ -0.53
GGA3-214ENST00000582717 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 PARD6AQ9NPB6 346 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 GPR173Q9NS66 373 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 GFOD1Q9NXC2 390 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 B4GALT7Q9UBV7 327 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 A0A1B0GV50 99 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 ZNF732B4DXR9 585 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 ZNF587BE7ETH6 402 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 RPL36A-HNRNPH2H7BZ11 118 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 TGOLN2O43493 480 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 HBE1P02100 147 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 ZNF32P17041 273 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 CCL20P78556 96 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 ZNF429Q86V71 674 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 FGFBP3Q8TAT2 258 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 Q8WTZ3 238 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 REEP6Q96HR9 211 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 FOXB1Q99853 325 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 NIPSNAP3BQ9BS92 247 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 GPR35Q9HC97 309 aa11.72□□□□□ -0.53
GGA3-214ENST00000582717 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.53
GGA3-214ENST00000582717 B4DEV8 164 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 TRDCB7Z8K6 153 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 MMP9P14780 707 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 NKX2-1P43699 371 aaPredicted RBP11.71□□□□□ -0.53
GGA3-214ENST00000582717 DLK1P80370 383 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 C9orf152Q5JTZ5 239 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 SP5Q6BEB4 398 aaPredicted RBP11.71□□□□□ -0.53
GGA3-214ENST00000582717 PIP4P1Q86T03 277 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 TMEM251Q8N6I4 163 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 ZNF383Q8NA42 475 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 SLAMF9Q96A28 289 aa11.71□□□□□ -0.53
GGA3-214ENST00000582717 LYRM2Q9NU23 88 aaPredicted RBP11.71□□□□□ -0.53
GGA3-214ENST00000582717 IGSF23A1L1A6 192 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 PPP1R2P9O14990 202 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 SCAF4O95104 1147 aaKnown RBP11.71□□□□□ -0.54
GGA3-214ENST00000582717 IGHV3-9P01782 118 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 GLIPR1P48060 266 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 BAXQ07812 192 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 ICAM4Q14773 271 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 LHFPL2Q6ZUX7 228 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 ZFP62Q8NB50 900 aaPredicted RBP11.71□□□□□ -0.54
GGA3-214ENST00000582717 OR10G4Q8NGN3 311 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 OR2AE1Q8NHA4 323 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 OR1F12Q8NHA8 337 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 SGK3Q96BR1 496 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 IL36GQ9NZH8 169 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.54
GGA3-214ENST00000582717 OTOGLQ3ZCN5 2332 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 ZNF407Q9C0G0 2248 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 C3orf85A0A1B0GTC6 90 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 DUXBA0A1W2PPF3 345 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 OR6C6A6NF89 314 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 CEACAM1P13688 526 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 HIST1H1BP16401 226 aaKnown RBP11.7□□□□□ -0.54
GGA3-214ENST00000582717 GPX4P36969 197 aaPredicted RBP11.7□□□□□ -0.54
GGA3-214ENST00000582717 VAMP2P63027 116 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 NKX6-1P78426 367 aaPredicted RBP11.7□□□□□ -0.54
GGA3-214ENST00000582717 RIPPLY2Q5TAB7 128 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 MDS2Q8NDY4 140 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 DEFB124Q8NES8 71 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 FER1L6-AS2Q96M78 137 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 NKX2-6A6NCS4 301 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 ZNF724A8MTY0 619 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 CDRT15L2A8MXV6 281 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 MPPED1O15442 326 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 NDUFS6O75380 124 aaKnown RBP11.7□□□□□ -0.54
GGA3-214ENST00000582717 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
GGA3-214ENST00000582717 CXCL1P09341 107 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms