RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 OR11H4Q8NGC9 324 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 OR5M8Q8NGP6 311 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 OR10Z1Q8NGY1 313 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 GRPEL2Q8TAA5 225 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 PLPPR1Q8TBJ4 325 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 WDR89Q96FK6 387 aaPredicted RBP12.34□□□□□ -0.43
MKS1-211ENST00000581761 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 OR2V2Q96R30 315 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 SLC23A1Q9UHI7 598 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 HSPB11Q9Y547 144 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 A1L4Q6 167 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 G3V3Q6 166 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 CCSO14618 274 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 DIRAS3O95661 229 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 PTBP3O95758 552 aaKnown RBP12.33□□□□□ -0.44
MKS1-211ENST00000581761 KNG1P01042 644 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 SCTP09683 121 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 CTXN2P0C2S0 81 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 NFYAP23511 347 aaPredicted RBP12.33□□□□□ -0.44
MKS1-211ENST00000581761 CHRNB4P30926 498 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 ZNF81P51508 661 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 H2BFSP57053 126 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 SEC61A1P61619 476 aaKnown RBP12.33□□□□□ -0.44
MKS1-211ENST00000581761 SNRPD2P62316 118 aaKnown RBP12.33□□□□□ -0.44
MKS1-211ENST00000581761 IFITM2Q01629 132 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 ABCA11PQ4W5N1 156 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 Q5BKY6 102 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 LAMTOR1Q6IAA8 161 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 MOB1BQ7L9L4 216 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 OR5T2Q8NGG2 359 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 COQ8AQ8NI60 647 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 ITLN1Q8WWA0 313 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 MOB3AQ96BX8 217 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 TMEM246Q9BRR3 403 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 TMEM165Q9HC07 324 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 DECR2Q9NUI1 292 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 OPN4Q9UHM6 478 aa12.33□□□□□ -0.44
MKS1-211ENST00000581761 A0A0B4J2A0 478 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 POM121CA8CG34 1229 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 BET1O15155 118 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 TK1P04183 234 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 EGR1P18146 543 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 UCP3P55916 312 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
MKS1-211ENST00000581761 ATXN7L3Q14CW9 347 aaPredicted RBP12.32□□□□□ -0.44
MKS1-211ENST00000581761 ZNF497Q6ZNH5 498 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 C20orf204Q6ZNR8 217 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 MOGAT3Q86VF5 341 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 SGPP2Q8IWX5 399 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 BOLLQ8N9W6 283 aaKnown RBP12.32□□□□□ -0.44
MKS1-211ENST00000581761 RNASE6Q93091 150 aaKnown RBP12.32□□□□□ -0.44
MKS1-211ENST00000581761 PDCD10Q9BUL8 212 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 RASL12Q9NYN1 266 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 TREM2Q9NZC2 230 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 COQ3Q9NZJ6 369 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 SHPKQ9UHJ6 478 aa12.32□□□□□ -0.44
MKS1-211ENST00000581761 PAIP2BQ9ULR5 123 aaKnown RBP12.32□□□□□ -0.44
MKS1-211ENST00000581761 TEX13DA0A0J9YY54 714 aaPredicted RBP12.31□□□□□ -0.44
MKS1-211ENST00000581761 NKX2-6A6NCS4 301 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 FAM25EA8MYX2 175 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 ZG16O60844 167 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 RGS11O94810 467 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 PPYP01298 95 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 RPS2P15880 293 aaKnown RBP12.31□□□□□ -0.44
MKS1-211ENST00000581761 HLA-GP17693 338 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 TNFSF4P23510 183 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 LMO1P25800 156 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 SUPT4H1P63272 117 aaKnown RBP12.31□□□□□ -0.44
MKS1-211ENST00000581761 ADORA2A-AS1P86434 159 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 TNFAIP6P98066 277 aaPredicted RBP12.31□□□□□ -0.44
MKS1-211ENST00000581761 HERPUD1Q15011 391 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 SPRNQ5BIV9 151 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 HIST2H2BCQ6DN03 193 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 ADAM5Q6NVV9 412 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 SLC38A6Q8IZM9 456 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 OR4A4PQ8NGN8 299 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 PIK3IP1Q96FE7 263 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 SLA2Q9H6Q3 261 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
MKS1-211ENST00000581761 TRAV39A0A0B4J263 110 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 TMEM30CPA0ZSE6 113 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 CRYM-AS1A6NIL9 109 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 RFPL4AA6NLU0 287 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 VSTM5A8MXK1 200 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 SRRM5B3KS81 715 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 RFPL4AL1F8VTS6 287 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 IFNA2P01563 188 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 TFF1P04155 84 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 OR4A8P0C604 315 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 RCC1P18754 421 aaPredicted RBP12.3□□□□□ -0.44
MKS1-211ENST00000581761 RBMXP38159 391 aaKnown RBP12.3□□□□□ -0.44
MKS1-211ENST00000581761 PIGPP57054 158 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 COL10A1Q03692 680 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 SRSF4Q08170 494 aaKnown RBP12.3□□□□□ -0.44
MKS1-211ENST00000581761 ADIPOQQ15848 244 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms