RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ADGRL4Q9HBW9 690 aa9.87□□□□□ -0.83
SS18-219ENST00000581570 CLN6Q9NWW5 311 aa9.87□□□□□ -0.83
SS18-219ENST00000581570 CHCHD3Q9NX63 227 aaKnown RBP9.87□□□□□ -0.83
SS18-219ENST00000581570 H2AFY2Q9P0M6 372 aaPredicted RBP9.87□□□□□ -0.83
SS18-219ENST00000581570 KIF25Q9UIL4 384 aa9.87□□□□□ -0.83
SS18-219ENST00000581570 SORL1Q92673 2214 aa9.87□□□□□ -0.83
SS18-219ENST00000581570 PLECQ15149 4684 aaKnown RBP9.87□□□□□ -0.83
SS18-219ENST00000581570 NPIPB11E5RHQ5 1161 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 HSPB6O14558 160 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 GNGT2O14610 69 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 MOSP00540 346 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 OCM2P0CE71 109 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 OCMP0CE72 109 aaPredicted RBP9.86□□□□□ -0.83
SS18-219ENST00000581570 CD1BP29016 333 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 ZP1P60852 638 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 ISL1P61371 349 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 SSX6Q7RTT6 188 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 RDH10Q8IZV5 341 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 OR10A7Q8NGE5 316 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 ST6GALNAC6Q969X2 333 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 SPATA25Q9BR10 227 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 CHCHD6Q9BRQ6 235 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 NCOR1P1Q9H4R4 102 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 RHOFQ9HBH0 211 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 C19orf73Q9NVV2 129 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 NDE1Q9NXR1 346 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
SS18-219ENST00000581570 LOC107986453A0A1B0GWG9 222 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 MAGEA13PA6NCF6 341 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 A8MZ25 164 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 PRKYO43930 277 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 IFNA6P05013 189 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 RAP2AP10114 183 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 ANXA8P13928 327 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 PRKACGP22612 351 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 PPIFP30405 207 aaKnown RBP9.85□□□□□ -0.83
SS18-219ENST00000581570 SLURP1P55000 103 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 F2RL1P55085 397 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 CDK5R1Q15078 307 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 ACSM6Q6P461 480 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 UTS2BQ765I0 119 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 HS3ST5Q8IZT8 346 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 Q8N1Y9 231 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 OR8H1Q8NGG4 311 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 OR5D18Q8NGL1 313 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 MRGPRDQ8TDS7 321 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 SPSB1Q96BD6 273 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 FGGYQ96C11 551 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 OPALINQ96PE5 141 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 SPACA5Q96QH8 159 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 TBX5Q99593 518 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 BARHL1Q9BZE3 327 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 OR51J1Q9H342 316 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 NEK6Q9HC98 313 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 TAGLN3Q9UI15 199 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 WSB1Q9Y6I7 421 aa9.85□□□□□ -0.83
SS18-219ENST00000581570 METTL15A6NJ78 407 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 ZNF736B4DX44 427 aaPredicted RBP9.84□□□□□ -0.83
SS18-219ENST00000581570 H0YJX3 145 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 UBCP0CG48 685 aaKnown RBP9.84□□□□□ -0.83
SS18-219ENST00000581570 ZNF20P17024 532 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 SSTR5P35346 364 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 RAB9AP51151 201 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 MNAT1P51948 309 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 CRISP1P54107 249 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 PAN3Q58A45 887 aaKnown RBP9.84□□□□□ -0.83
SS18-219ENST00000581570 LYPD6Q86Y78 171 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 SGPP2Q8IWX5 399 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 SAXO1Q8IYX7 474 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 PRSS35Q8N3Z0 413 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 TMEM104Q8NE00 496 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 IL17DQ8TAD2 202 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 ARPC1AQ92747 370 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 ALX4Q9H161 411 aaPredicted RBP9.84□□□□□ -0.83
SS18-219ENST00000581570 ARL8BQ9NVJ2 186 aa9.84□□□□□ -0.83
SS18-219ENST00000581570 ARGLU1Q9NWB6 273 aaPredicted RBP9.84□□□□□ -0.83
SS18-219ENST00000581570 ZNF107Q9UII5 783 aaPredicted RBP9.84□□□□□ -0.83
SS18-219ENST00000581570 TRAV39A0A0B4J263 110 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 LINC01619G3V211 115 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 G3V318 75 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 OR8U9P0C7N5 309 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 MS4A2Q01362 244 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 TRIM25Q14258 630 aaKnown RBP9.83□□□□□ -0.84
SS18-219ENST00000581570 GALEQ14376 348 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 AADACL4Q5VUY2 407 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 TMEM244Q5VVB8 128 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 NXNL2Q5VZ03 156 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 RTN4IP1Q8WWV3 396 aaPredicted RBP9.83□□□□□ -0.84
SS18-219ENST00000581570 EME1Q96AY2 570 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 RBMXL1Q96E39 390 aaKnown RBP9.83□□□□□ -0.84
SS18-219ENST00000581570 OR4C12Q96R67 309 aa9.83□□□□□ -0.84
SS18-219ENST00000581570 NR1H4Q96RI1 486 aaPredicted RBP9.83□□□□□ -0.84
SS18-219ENST00000581570 TRAV24A0A0B4J272 114 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 A0A1W2PQL4 384 aaPredicted RBP9.82□□□□□ -0.84
SS18-219ENST00000581570 SULT1C4O75897 302 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 IGLV1-40P01703 118 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 SLC2A2P11168 524 aaPredicted RBP9.82□□□□□ -0.84
SS18-219ENST00000581570 IL3RAP26951 378 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 KIR3DL2P43630 455 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 PITPNAQ00169 270 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms