RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MAGI1Q96QZ7 1491 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 COL5A1P20908 1838 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 IGHV1-45A0A0A0MS14 117 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 FAM183AA6NL82 134 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 FAM25EA8MYX2 175 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 RNASEK-C17orf49H0YIS7 233 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 TCF21O43680 179 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 SPNP16150 400 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 ZNF3P17036 446 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 LGALS3P17931 250 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 PSMB9P28065 219 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 CBX5P45973 191 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 KCNJ3P48549 501 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 TPBGQ13641 420 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 BCL2A1Q16548 175 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 LAIR2Q6ISS4 152 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 HCP5Q6MZN7 132 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 DGAT2L6Q6ZPD8 337 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 CLEC20AQ6ZU45 233 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 FAM183BPQ6ZVS7 135 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 C3orf22Q8N5N4 141 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 ZIC4Q8N9L1 334 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 LY6G5BQ8NDX9 201 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 BPIFB6Q8NFQ5 453 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 APOBEC3DQ96AK3 386 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 POLR3AO14802 1390 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 PRDM2Q13029 1718 aa2.19□□□□□ -2.06
SMCHD1-205ENST00000581383 PBRM1Q86U86 1689 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 ABCB11O95342 1321 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 ATRNO75882 1429 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 NUP160Q12769 1436 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 WRNQ14191 1432 aaPredicted RBP eCLIP2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 ABCA10Q8WWZ4 1543 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 TRAV8-2A0A0B4J237 113 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 K7ERQ8 282 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 POP7O75817 140 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 PDYNP01213 254 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 CTLA4P16410 223 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 PYCR1P32322 319 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 RHOAP61586 193 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 FLOT2Q14254 428 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 CASP8Q14790 479 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 OLIG3Q7RTU3 272 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 MRPL52Q86TS9 123 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 SLC25A45Q8N413 288 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 ZNF738Q8NE65 137 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 OR5P3Q8WZ94 311 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 REEP6Q96HR9 211 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 PYURFQ96I23 114 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 SERPINB11Q96P15 392 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 TRIB3Q96RU7 358 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 METTL8Q9H825 291 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 NAGKQ9UJ70 344 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 TBL2Q9Y4P3 447 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 U3KQK5 164 aa2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 YLPM1P49750 1951 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-205ENST00000581383 OR5H14A6NHG9 310 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 E7EQL1 145 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 YKT6O15498 198 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 FABP7O15540 132 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 CRXO43186 299 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 SGCEO43556 437 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 TNFAIP8O95379 198 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 SNAP29O95721 258 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 GPR75O95800 540 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 FADS2O95864 444 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 MAGEA6P43360 314 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 DHRS2Q13268 280 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 RAB31Q13636 194 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 OR10J3Q5JRS4 329 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 COPS6Q7L5N1 327 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 LRP11Q86VZ4 500 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 LYPD6Q86Y78 171 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 TMEM25Q86YD3 366 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 FAM45AQ8TCE6 357 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 MRAP2Q96G30 205 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 FAAP24Q9BTP7 215 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 FHAD1B1AJZ9 1412 aa2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 PRG4Q92954 1404 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-205ENST00000581383 IGLV10-54A0A075B6I4 117 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 IGKV1D-37A0A075B6S9 117 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 A0A1B0GTI1 187 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 SULT1C2O00338 296 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 EVI2BP34910 448 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 OR2B6P58173 313 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 OR10A3P58181 314 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 LYZL2Q7Z4W2 148 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 FAM19A3Q7Z5A8 133 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 ACBD4Q8NC06 268 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 OR4A5Q8NH83 315 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 CLDN23Q96B33 292 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 CYTH2Q99418 400 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 OR2D2Q9H210 308 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 TREM1Q9NP99 234 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 CHMP5Q9NZZ3 219 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 OR5V1Q9UGF6 321 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 TOP2BQ02880 1626 aa2.16□□□□□ -2.06
SMCHD1-205ENST00000581383 ARGFXA6NJG6 315 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 POLR3GO15318 223 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 TNFRSF9Q07011 255 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms