RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ZNF880Q6PDB4 577 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 TRAT1Q6PIZ9 186 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 Q6ZS49 121 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 DEDD2Q8WXF8 326 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 RAB39BQ96DA2 213 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 HDHD3Q9BSH5 251 aaPredicted RBP8.92□□□□□ -0.98
SS18-213ENST00000579640 ZNF286AQ9HBT8 521 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 KLK11Q9UBX7 282 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 LPAR3Q9UBY5 353 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 UNC79Q9P2D8 2635 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 CRYBG3Q68DQ2 2970 aa8.92□□□□□ -0.98
SS18-213ENST00000579640 MEIKINA0A087WXM9 373 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 TRBV23-1A0A0A0MS06 115 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 KIR2DS1A0A191URI9 304 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ODAMA1E959 279 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 KIR2DS4P43632 304 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 EDDM3BP56851 147 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 MEF2CQ06413 473 aaPredicted RBP8.91□□□□□ -0.98
SS18-213ENST00000579640 KIR2DS1Q14954 304 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 C6orf183Q5T699 404 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 C16orf87Q6PH81 154 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ZNF841Q6ZN19 808 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ZNF554Q86TJ5 538 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 CYYR1Q96J86 154 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 Q9N2K0 584 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
SS18-213ENST00000579640 OR6C3Q9NZP0 311 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 CLN8Q9UBY8 286 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 KIF25Q9UIL4 384 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 TRAPPC2LQ9UL33 140 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 CENPEQ02224 2701 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 FBN2P35556 2912 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 hADV38S2A0JD32 116 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 MEIS3P1A6NDR6 274 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 IGHV2-5P01817 119 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 HEXAP06865 529 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 TBPP20226 339 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 GLIPR1P48060 266 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 TAS2R19P59542 299 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 DCTN2Q13561 401 aaKnown RBP8.91□□□□□ -0.98
SS18-213ENST00000579640 CR1LQ2VPA4 569 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ACTBL2Q562R1 376 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ESCO2Q56NI9 601 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 WDR25Q64LD2 544 aaPredicted RBP8.91□□□□□ -0.98
SS18-213ENST00000579640 TOMM5Q8N4H5 51 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 TMEM229BQ8NBD8 167 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 BEST4Q8NFU0 473 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 OR4K15Q8NH41 348 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 CLDND2Q8NHS1 167 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 SETD6Q8TBK2 473 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ST6GALNAC5Q9BVH7 336 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 RAB9BQ9NP90 201 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ABCB10Q9NRK6 738 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 ING3Q9NXR8 418 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 KCNIP1Q9NZI2 227 aa8.91□□□□□ -0.98
SS18-213ENST00000579640 CELSR2Q9HCU4 2923 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 IGHV4-30-2A0A087WSY4 118 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 TRGV10A0A0A0MS01 117 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 A0A1W2PQ09 198 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 ANKRD20A5PA0PJZ0 165 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 LANCL1O43813 399 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 GZMHP20718 246 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 TAS2R46P59540 309 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 GNB2P62879 340 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 Q5PR19 223 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 ZNF57Q68EA5 555 aaPredicted RBP8.9□□□□□ -0.98
SS18-213ENST00000579640 GVQW1Q8N7I0 195 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 ZNF565Q8N9K5 539 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 CORO2AQ92828 525 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 FOXC2Q99958 501 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
SS18-213ENST00000579640 NARFLQ9H6Q4 476 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 OPN4Q9UHM6 478 aa8.9□□□□□ -0.98
SS18-213ENST00000579640 ZNF230Q9UIE0 474 aaPredicted RBP8.9□□□□□ -0.98
SS18-213ENST00000579640 ANKRD17O75179 2603 aaKnown RBP8.9□□□□□ -0.99
SS18-213ENST00000579640 ABCA12Q86UK0 2595 aa8.9□□□□□ -0.99
SS18-213ENST00000579640 ZNF736B4DX44 427 aaPredicted RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 TRDCB7Z8K6 153 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 FCN3O75636 299 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 FAUP35544 74 aaKnown RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 LMO4P61968 165 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 RPL31P62899 125 aaKnown RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 HLA-DRB3P79483 266 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 DYRK1AQ13627 763 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 KLF9Q13886 244 aaPredicted RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 CD276Q5ZPR3 534 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 TPRX1Q8N7U7 411 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 CCDC107Q8WV48 283 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 ZFAND2BQ8WV99 257 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 H1FXQ92522 213 aaKnown RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 SNAPC3Q92966 411 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 COX4I2Q96KJ9 171 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 DMRTB1Q96MA1 342 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 C7orf50Q9BRJ6 194 aaKnown RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 DCTN5Q9BTE1 182 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 ANXA10Q9UJ72 324 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 UBE2J1Q9Y385 318 aaPredicted RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 LINC00312Q9Y6C7 94 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 NBPF19A0A087WUL8 3843 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 A0A1W2PPH5 198 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms