RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	RIBC2	Q9H4K1	309 aa		7.54	□□□□□ -1.2
MSI2-208	ENST00000579466	FRRS1L	Q9P0K9	344 aa		7.54	□□□□□ -1.2
MSI2-208	ENST00000579466	SCOC	Q9UIL1	159 aa		7.54	□□□□□ -1.2
MSI2-208	ENST00000579466	SMAD5-AS1	Q9Y6J3	95 aa		7.54	□□□□□ -1.2
MSI2-208	ENST00000579466	IGHV3-43	A0A0B4J1X8	118 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	TRAV24	A0A0B4J272	114 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	IGHV1-3	A0A0C4DH29	117 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	TCRBV3S1	A0A5B6	114 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466		G3V2T6	193 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	CCRL2	O00421	344 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	RRP9	O43818	475 aa	Known RBP	7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	ZFPL1	O95159	310 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	HTR1A	P08908	422 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	IGHV3-43D	P0DP04	118 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	VDAC1	P21796	283 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	MYF6	P23409	242 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	C21orf33	P30042	268 aa	Predicted RBP	7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	POLR2I	P36954	125 aa	Known RBP	7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	TGIF2LX	Q8IUE1	241 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	ZNF565	Q8N9K5	539 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	CCDC197	Q8NCU1	140 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	OR11H1	Q8NG94	326 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	OR51T1	Q8NGJ9	327 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	EME1	Q96AY2	570 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	NRBF2	Q96F24	287 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	MBOAT4	Q96T53	435 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	CIB1	Q99828	191 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	HSPB9	Q9BQS6	159 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	ZNF581	Q9P0T4	197 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	POMP	Q9Y244	141 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	MYRF	Q9Y2G1	1151 aa		7.53	□□□□□ -1.2
MSI2-208	ENST00000579466	ZNF736	B4DX44	427 aa	Predicted RBP	7.52	□□□□□ -1.21
MSI2-208	ENST00000579466		J3QLW9	94 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	GYG2	O15488	501 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	GAPDH	P04406	335 aa	Known RBP	7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	CGB3	P0DN86	165 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	CGB7	P0DN87	165 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	SLC2A2	P11168	524 aa	Predicted RBP	7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	ZNF19	P17023	458 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	HOXB6	P17509	224 aa	Known RBP	7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	CHAT	P28329	748 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	ZP1	P60852	638 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	ISL1	P61371	349 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	FOXE3	Q13461	319 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	KIR2DS1	Q14954	304 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	KISS1	Q15726	138 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	PIGY	Q3MUY2	71 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	RSBN1	Q5VWQ0	802 aa	Predicted RBP	7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	KDM4D	Q6B0I6	523 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	AMIGO2	Q86SJ2	522 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	SATL1	Q86VE3	508 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	SBSPON	Q8IVN8	264 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466		Q8N9W7	124 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	OR2T10	Q8NGZ9	312 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	CNIH3	Q8TBE1	160 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	TNFAIP8L1	Q8WVP5	186 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	C4orf3	Q8WVX3	66 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	TSEN15	Q8WW01	171 aa	Known RBP	7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	GPER1	Q99527	375 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	RASL11B	Q9BPW5	248 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	GON7	Q9BXV9	100 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	BARHL1	Q9BZE3	327 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	ABCG5	Q9H222	651 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	ZCCHC4	Q9H5U6	513 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	ISYNA1	Q9NPH2	558 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	LIN7C	Q9NUP9	197 aa	Known RBP	7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	STARD9	Q9P2P6	4700 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	DNAH1	Q9P2D7	4330 aa		7.52	□□□□□ -1.21
MSI2-208	ENST00000579466	DAPL1	A0PJW8	107 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	NPIPB11	E5RHQ5	1161 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	SDCBP	O00560	298 aa	Predicted RBP	7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	GABRP	O00591	440 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	SLC16A6	O15403	523 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	SULT1B1	O43704	296 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	MPZL2	O60487	215 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	HTR3B	O95264	441 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	ISG15	P05161	165 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	ELANE	P08246	267 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	DBT	P11182	482 aa	Known RBP	7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	LYL1	P12980	280 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	CDX1	P47902	265 aa	Predicted RBP	7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	MTNR1B	P49286	362 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	ZNF816	Q0VGE8	651 aa	Predicted RBP	7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	ZNF691	Q5VV52	312 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	ZDHHC13	Q8IUH4	622 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	IZUMO1	Q8IYV9	350 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	SAXO1	Q8IYX7	474 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	OR8J1	Q8NGP2	316 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	CCDC107	Q8WV48	283 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	RNFT2	Q96EX2	444 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	C4orf36	Q96KX1	117 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	KCTD7	Q96MP8	289 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	S1PR3	Q99500	378 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	GNB4	Q9HAV0	340 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	FAM118A	Q9NWS6	357 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	WSB1	Q9Y6I7	421 aa		7.51	□□□□□ -1.21
MSI2-208	ENST00000579466	SAC3D1	A6NKF1	404 aa		7.5	□□□□□ -1.21
MSI2-208	ENST00000579466	OR4C45	A6NMZ5	311 aa		7.5	□□□□□ -1.21
MSI2-208	ENST00000579466	SLC31A2	O15432	143 aa		7.5	□□□□□ -1.21
MSI2-208	ENST00000579466	SAP30	O75446	220 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms