RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 ERRFI1Q9UJM3 462 aaPredicted RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 EMCNQ9ULC0 261 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ODAMA1E959 279 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 IGSF23A1L1A6 192 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 MAP1LC3B2A6NCE7 125 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 CA6P23280 308 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 DCTDP32321 178 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 EBLN2Q6P2I7 272 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 STAC2Q6ZMT1 411 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 Q7L0L9 218 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 H1FOOQ8IZA3 346 aaPredicted RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 SPSB1Q96BD6 273 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 MAP1LC3BQ9GZQ8 125 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 RBM38Q9H0Z9 239 aaKnown RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 TECRQ9NZ01 308 aaKnown RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 HCSTQ9UBK5 93 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 IGHA1P01876 353 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 IGHA2P01877 340 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ADRA2AP08913 450 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SEC11AP67812 179 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 GPNMBQ14956 572 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 CCSMST1Q4G0I0 132 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 C1orf220Q5T0J3 134 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 LEMD1Q68G75 181 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SMIM19Q96E16 107 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ALKBH3Q96Q83 286 aaPredicted RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 LTB4R2Q9NPC1 389 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SIPA1L1O43166 1804 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 P01737 135 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SBK3P0C264 359 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SRFP11831 508 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 CDAP32320 146 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 LIPAP38571 399 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 CAPZBP47756 277 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SLC25A1P53007 311 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 RIPPLY3P57055 190 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 FAM78BQ5VT40 261 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 FAAP20Q6NZ36 180 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 LILRA3Q8N6C8 439 aaPredicted RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 PRRX2Q99811 253 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 CNTD2Q9H8S5 307 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ZNF71Q9NQZ8 489 aaPredicted RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 ACER3Q9NUN7 267 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 OR6C3Q9NZP0 311 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 NAT8Q9UHE5 227 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 TMEM202A6NGA9 273 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 H0Y8X5 98 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ATP5G1P05496 136 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ATP5G3P48201 142 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 LOXL3P58215 753 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 MRPS11P82912 194 aaKnown RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 ATP5G2Q06055 141 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 HLA-DRB5Q30154 266 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 OR10D4PQ8NGN7 298 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 TMEM171Q8WVE6 324 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 IL19Q9UHD0 177 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SMPXQ9UHP9 88 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 A0A1W2PR48 441 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 NPIPB9F8W1W9 429 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ZNF737O75373 536 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 RPS27P42677 84 aaKnown RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 PDCD1Q15116 288 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 OR10G9Q8NGN4 311 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 OR10G7Q8NGN6 311 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 C16orf52Q8NHV5 167 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 PTPMT1Q8WUK0 201 aaPredicted RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 FLYWCH2Q96CP2 140 aaKnown RBP4.55□□□□□ -1.68
NF1-219ENST00000579081 TUBD1Q9UJT1 453 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 B9D1Q9UPM9 204 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SPTA1P02549 2419 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 ANKRD36A6QL64 1941 aa4.55□□□□□ -1.68
NF1-219ENST00000579081 SPINK9Q5DT21 86 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 TMEM179BQ7Z7N9 219 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 ZNF519Q8TB69 540 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 PATE1Q8WXA2 126 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 RND1Q92730 232 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 WSB2Q9NYS7 404 aaPredicted RBP4.54□□□□□ -1.68
NF1-219ENST00000579081 IL17BQ9UHF5 180 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 A0A1W2PPC4 97 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 NDUFB6O95139 128 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 FABP2P12104 132 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 FPR2P25090 351 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 WDR25Q64LD2 544 aaPredicted RBP4.54□□□□□ -1.68
NF1-219ENST00000579081 C6orf201Q7Z4U5 140 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 OR8I2Q8N0Y5 310 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 SPEM1Q8N4L4 309 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 NUDT10Q8NFP7 164 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 OR4P4Q8NGL7 312 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 SPACA9Q96E40 222 aaPredicted RBP4.54□□□□□ -1.68
NF1-219ENST00000579081 ASB16Q96NS5 453 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 PSMG3Q9BT73 122 aaPredicted RBP4.54□□□□□ -1.68
NF1-219ENST00000579081 TMUB1Q9BVT8 246 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 OR2D2Q9H210 308 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 PLSCR4Q9NRQ2 329 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 MEX3AA1L020 520 aaKnown RBP4.54□□□□□ -1.68
NF1-219ENST00000579081 TAPBPO15533 448 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 GABRA1P14867 456 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 MYOGP15173 224 aa4.54□□□□□ -1.68
NF1-219ENST00000579081 RPS4Y1P22090 263 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms