RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 CCL11P51671 97 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 AKR1C2P52895 323 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 F2RL1P55085 397 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ERVK11-1P61568 191 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SRSF3P84103 164 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 AKR1C1Q04828 323 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ZNF169Q14929 603 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GUSBP1Q15486 140 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GABRA6Q16445 453 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FAM74A3Q4VXF1 159 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PCSK4Q6UW60 755 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGFL2Q6UWQ7 119 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 WDR86Q86TI4 376 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 MYPOPQ86VE0 399 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CMTM1Q8IZ96 169 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 C17orf78Q8N4C9 275 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CLEC18CQ8NCF0 446 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 DEFB124Q8NES8 71 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OR5D13Q8NGL4 314 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 LILRB1Q8NHL6 650 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SLC25A40Q8TBP6 338 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 RDH5Q92781 318 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 KIRREL1Q96J84 757 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TRIB1Q96RU8 372 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NRIP2Q9BQI9 281 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ADAT1Q9BUB4 502 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SEC11CQ9BY50 192 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TMEM231Q9H6L2 316 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FAM212BQ9NTI7 297 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 UQCC1Q9NVA1 299 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TREM2Q9NZC2 230 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 STRAPQ9Y3F4 350 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OR2W1Q9Y3N9 320 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TRAV17A0A0B4J275 112 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SPAARA0A1B0GVQ0 90 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TMEM210A6NLX4 147 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 RNASEK-C17orf49H0YIS7 233 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NUPL2O15504 423 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ADAM20O43506 726 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PITX3O75364 302 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PGLYRP1O75594 196 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CNOT4O95628 575 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SPP1P10451 314 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CBR1P16152 277 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SPINK2P20155 84 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 RAB5CP51148 216 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ARHGDIBP52566 201 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 VAMP2P63027 116 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 EWSR1Q01844 656 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GUCA2BQ16661 112 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NMSQ5H8A3 153 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CLEC9AQ6UXN8 241 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FAM214BQ7L5A3 538 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PUSL1Q8N0Z8 303 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OR2C3Q8N628 320 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 COMMD1Q8N668 190 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SCCPDHQ8NBX0 429 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 C1orf162Q8NEQ5 155 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OR10J5Q8NHC4 309 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 LYPD6BQ8NI32 183 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PLPPR1Q8TBJ4 325 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 BOD1Q96IK1 185 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OR2J1Q9GZK6 312 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SLC25A31Q9H0C2 315 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PARD6AQ9NPB6 346 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ASCL3Q9NQ33 180 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PURGQ9UJV8 347 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FAM96BQ9Y3D0 163 aa7.94□□□□□ -1.14
CDK5RAP3-208ENST00000578525 EYSQ5T1H1 3165 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 A0A1W2PR80 420 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGSF23A1L1A6 192 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FAM24AA6NFZ4 105 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TRIM77I1YAP6 450 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SIRPB1O00241 398 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SLC33A1O00400 549 aaPredicted RBP7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 LYZL6O75951 148 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SNAPINO95295 136 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OR2H2O95918 312 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CD5P06127 495 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ACAA1P09110 424 aaPredicted RBP7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 DANCRP0C864 163 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PGA5P0DJD9 388 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 COX5AP20674 150 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 VDAC1P21796 283 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ERVS71-1P61550 626 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 POLR2GP62487 172 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SRSF6Q13247 344 aaKnown RBP7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OR8G1Q15617 311 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGFBP7Q16270 282 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FAM76BQ5HYJ3 339 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 DHRS7BQ6IAN0 325 aaPredicted RBP7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGF2-ASQ6U949 168 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FIP1L1Q6UN15 594 aaKnown RBP7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ZNF497Q6ZNH5 498 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 C20orf204Q6ZNR8 217 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 Q6ZT83 130 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GCNT2Q8N0V5 402 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CLRN3Q8NCR9 226 aa7.93□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FDCSPQ8NFU4 85 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms