RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 HOXA6P31267 233 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZXDAP98168 799 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZP4Q12836 540 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 PRR27Q6MZM9 219 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 GFI1Q99684 422 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 RALGAPA2Q2PPJ7 1873 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 PLXNA1Q9UIW2 1896 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 A0A1B0GU03 582 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 UBE2CO00762 179 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 GYPAP02724 150 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 MELTFP08582 738 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 TGIF2LXQ8IUE1 241 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR2V1Q8NHB1 315 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 RAB24Q969Q5 203 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 RNF126Q9BV68 326 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 DUSP13Q9UII6 198 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZNF253O75346 499 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 SCGB2A1O75556 95 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 IL11P20809 199 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 SERF2P84101 59 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 VN1R17PQ8TDU5 208 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 EDARADDQ8WWZ3 215 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 RSG1Q9BU20 258 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 CTXND1A0A1B0GTU2 59 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 TCF21O43680 179 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 BIVMQ86UB2 503 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 C9orf40Q8IXQ3 194 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR4A4PQ8NGN8 299 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 STARD4Q96DR4 205 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 CHRDL1Q9BU40 450 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 GREB1Q4ZG55 1949 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 A0A087WV48 116 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 F8VVB4 439 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 F8VWA3 439 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 TNFSF4P23510 183 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 CXorf66Q5JRM2 361 aaPredicted RBP11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 ANKRD37Q7Z713 158 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR52M1Q8NGK5 317 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 S1PR3Q99500 378 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 PCGF1Q9BSM1 259 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 AURKAIP1Q9NWT8 199 aaPredicted RBP11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 COA4Q9NYJ1 87 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 FAM166BA8MTA8 275 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 MYF5P13349 255 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 PAX5Q02548 391 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 UNC119Q13432 240 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 FAM206AQ9NX38 181 aa11.47□□□□□ -0.57
PCDHGB3-201ENST00000576222 CER1O95813 267 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 RPEL1Q2QD12 228 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 WDR73Q6P4I2 378 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 SFTPA2Q8IWL1 248 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZNF519Q8TB69 540 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 MRGPRFQ96AM1 343 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 NAGKQ9UJ70 344 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 TAS2R60P59551 318 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 EGR4Q05215 589 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 CT45A1Q5HYN5 189 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 WDR25Q64LD2 544 aaPredicted RBP11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 LINC00696Q6ZRV3 163 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 CT45A3Q8NHU0 189 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 ACY3Q96HD9 319 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 KCNK17Q96T54 332 aa11.46□□□□□ -0.57
PCDHGB3-201ENST00000576222 TP53BP1Q12888 1972 aaPredicted RBP11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 NGFP01138 241 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 GNG4P50150 75 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 HIKESHIQ53FT3 197 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 TIPARPQ7Z3E1 657 aaKnown RBP11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR10AD1Q8NGE0 317 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 GABRG3Q99928 467 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 ZNF552Q9H707 407 aaPredicted RBP11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 GBF1Q92538 1859 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 CHD5Q8TDI0 1954 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 UNC13CQ8NB66 2214 aa11.46□□□□□ -0.58
PCDHGB3-201ENST00000576222 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 COLCA2A8K830 154 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 CD46P15529 392 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 P4HTMQ9NXG6 502 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 C5orf52A6NGY3 159 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 MEF2BQ02080 365 aaPredicted RBP11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 RNASEKQ6P5S7 137 aaKnown RBP11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 ZNF721Q8TF20 911 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 TRIB1Q96RU8 372 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 H0YIZ8 118 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR5G3P0C626 314 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 RPS23P62266 143 aaKnown RBP11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 SPATA46Q5T0L3 261 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 VHLLQ6RSH7 139 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 SGMS2Q8NHU3 365 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 CBLN4Q9NTU7 201 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 ZNF646O15015 1829 aaPredicted RBP11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 DHRS7CA6NNS2 312 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms