RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 IGKV1-12A0A0C4DH73 117 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 IL18BPO95998 194 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 IGKV1D-12P01611 117 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 DCAF7P61962 342 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 RBKSQ9H477 322 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 CCL28Q9NRJ3 127 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 A0A087WWC5 75 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 IGKV3D-11A0A0A0MRZ8 115 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 ANKUB1A6NFN9 424 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 MBP02144 154 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 SCTP09683 121 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 FOSL2P15408 326 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 EGR1P18146 543 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 GZMHP20718 246 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 NPBWR2P48146 333 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 FAM3BP58499 235 aaPredicted RBP12.55□□□□□ -0.4
SCARF1-209ENST00000576012 PAX5Q02548 391 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 TCEAL6Q6IPX3 200 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 SLC35E3Q7Z769 313 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 RIMS4Q9H426 269 aaPredicted RBP12.55□□□□□ -0.4
SCARF1-209ENST00000576012 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 CACNA1DQ01668 2161 aa12.55□□□□□ -0.4
SCARF1-209ENST00000576012 A6NJY4 79 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 IFNA5P01569 189 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 TNFRSF4P43489 277 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 ZP4Q12836 540 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 TEX38Q6PEX7 206 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 Q6ZPA2 131 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 A0A1B0GU03 582 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 PITX3O75364 302 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 D2HGDHQ8N465 521 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 SCGB1C1Q8TD33 95 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 IL1F10Q8WWZ1 152 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 IGKV1D-13A0A0B4J2D9 117 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 LOC102723971A0A1B0GUV8 181 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 IGKV1-13P0DP09 117 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 CHRNA7P36544 502 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 ZNF133P52736 654 aaPredicted RBP12.54□□□□□ -0.4
SCARF1-209ENST00000576012 RSPO1Q2MKA7 263 aaPredicted RBP12.54□□□□□ -0.4
SCARF1-209ENST00000576012 HLA-BQ31612 363 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 SLC25A47Q6Q0C1 308 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 LYRM2Q9NU23 88 aaPredicted RBP12.54□□□□□ -0.4
SCARF1-209ENST00000576012 IL36RNQ9UBH0 155 aa12.54□□□□□ -0.4
SCARF1-209ENST00000576012 DOCK7Q96N67 2140 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 DFFBO76075 338 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 CYB5R3P00387 301 aaPredicted RBP12.53□□□□□ -0.4
SCARF1-209ENST00000576012 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 ECI1P42126 302 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 ZNF468Q5VIY5 522 aaPredicted RBP12.53□□□□□ -0.4
SCARF1-209ENST00000576012 OR8G2PQ6IF36 304 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 TP53TG5Q9Y2B4 290 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 MMACHCQ9Y4U1 282 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 A0A0G2JRQ6 117 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 HNF1AP20823 631 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
SCARF1-209ENST00000576012 MALLQ13021 153 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 SLC25A26Q70HW3 274 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 ST8SIA1Q92185 356 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 IL22RA2Q969J5 263 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 TM2D1Q9BX74 207 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 DKKL1Q9UK85 242 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 R4GN57 208 aa12.53□□□□□ -0.4
SCARF1-209ENST00000576012 BLACEA4D250 179 aa12.52□□□□□ -0.4
SCARF1-209ENST00000576012 BCL2P10415 239 aa12.52□□□□□ -0.4
SCARF1-209ENST00000576012 HOXC12P31275 282 aa12.52□□□□□ -0.4
SCARF1-209ENST00000576012 GNG10P50151 68 aa12.52□□□□□ -0.4
SCARF1-209ENST00000576012 SSC4DQ8WTU2 575 aa12.52□□□□□ -0.4
SCARF1-209ENST00000576012 MSL2Q9HCI7 577 aa12.52□□□□□ -0.4
SCARF1-209ENST00000576012 IGHV3-64DA0A0J9YX35 117 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 H7BYZ3 331 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 MSR1P21757 451 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 GALR1P47211 349 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 PMP22Q01453 160 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
SCARF1-209ENST00000576012 OSR2Q8N2R0 312 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 GJC3Q8NFK1 279 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 FAM131CQ96AQ9 280 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 GNPNAT1Q96EK6 184 aaPredicted RBP12.52□□□□□ -0.41
SCARF1-209ENST00000576012 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 TMEM222Q9H0R3 208 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 LRRC3CA6NJW4 275 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 NPSP0C0P6 89 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 ZFP36L1Q07352 338 aaKnown RBP12.52□□□□□ -0.41
SCARF1-209ENST00000576012 FOXO1Q12778 655 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 HYAL1Q12794 435 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 C9orf135Q5VTT2 229 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 PLCXD3Q63HM9 321 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 TMPRSS7Q7RTY8 843 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 MOB3AQ96BX8 217 aa12.52□□□□□ -0.41
SCARF1-209ENST00000576012 TWSG1Q9GZX9 223 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms