RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 YIPF7Q8N8F6 280 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 CHST4Q8NCG5 386 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 MRGPRDQ8TDS7 321 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 TEX12Q9BXU0 123 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 RETNQ9HD89 108 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 ACTR3BQ9P1U1 418 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 ZNF107Q9UII5 783 aaPredicted RBP12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 IGKV1-9A0A0C4DH69 117 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 SLC2A2P11168 524 aaPredicted RBP12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 ATP6V1B2P21281 511 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 CD1BP29016 333 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 PITPNAQ00169 270 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR8H1Q8NGG4 311 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR5D18Q8NGL1 313 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 LINC00476Q8WZB0 136 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 TUBA4BQ9H853 241 aa12.53□□□□□ -0.4
CTDNEP1-211ENST00000575783 IGHV4OR15-8A0A075B7B6 117 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 A0A087WW49 117 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 TRAV39A0A0B4J263 110 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 NPIPB11E5RHQ5 1161 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 ZNF670-ZNF695F2Z2N8 137 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 HSPA12AO43301 675 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 KDM4BO94953 1096 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 IGLV1-40P01703 118 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 OCM2P0CE71 109 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 OCMP0CE72 109 aaPredicted RBP12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 OSMP13725 252 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 PRKACBP22694 351 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 SSTR5P35346 364 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 SLC16A12Q6ZSM3 486 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 RDH10Q8IZV5 341 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 TMEM104Q8NE00 496 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 PP6455Q8WZ26 134 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 SPACA5Q96QH8 159 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 FAM110AQ9BQ89 295 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 CHCHD6Q9BRQ6 235 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 RSRP1Q9BUV0 290 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 TMED9Q9BVK6 235 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 NEK6Q9HC98 313 aa12.52□□□□□ -0.41
CTDNEP1-211ENST00000575783 KRT8P05787 483 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 ATF1P18846 271 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 CNTFRP26992 372 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 PRDX6P30041 224 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 PAN3Q58A45 887 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 BCDIN3DQ7Z5W3 292 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 ANKRD13BQ86YJ7 626 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 PGAM4Q8N0Y7 254 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 NR1H4Q96RI1 486 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 BARHL1Q9BZE3 327 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 TOLLIPQ9H0E2 274 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 ZCCHC4Q9H5U6 513 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 MAGIXQ9H6Y5 334 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 ZNF556Q9HAH1 456 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 PARP11Q9NR21 331 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 ZNF580Q9UK33 172 aa12.51□□□□□ -0.41
CTDNEP1-211ENST00000575783 KIAA1109Q2LD37 5005 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 LOC107986453A0A1B0GWG9 222 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 TCRBV5S2A0A599 114 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 C12orf77C9JDV5 145 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 H0YJX3 145 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 KIR3DL2P43630 455 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 GALEQ14376 348 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 CDK5R1Q15078 307 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 SSX6Q7RTT6 188 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 TMEM179BQ7Z7N9 219 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 SATL1Q86VE3 508 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 CCDC54Q8NEL0 328 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 OR10A7Q8NGE5 316 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 CASTOR1Q8WTX7 329 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 FGGYQ96C11 551 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 C10orf35Q96D05 121 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 MNTQ99583 582 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 TBX5Q99593 518 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 ELOVL1Q9BW60 279 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 ADGRL4Q9HBW9 690 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 CLN6Q9NWW5 311 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 DNAH10Q8IVF4 4471 aa12.5□□□□□ -0.41
CTDNEP1-211ENST00000575783 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 FAM90A10PA6NDY2 464 aa12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 ATP6V0E1O15342 81 aa12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 FAM98BQ52LJ0 330 aaKnown RBP12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 OPALINQ96PE5 141 aa12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 TPSG1Q9NRR2 321 aa12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 H2AFY2Q9P0M6 372 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 STUB1Q9UNE7 303 aa12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 MYRFQ9Y2G1 1151 aa12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 MRPS28Q9Y2Q9 187 aaKnown RBP12.49□□□□□ -0.41
CTDNEP1-211ENST00000575783 KMT2AQ03164 3969 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 CST1P01037 141 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 IGLV1-51P01701 117 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 LGALS1P09382 135 aaKnown RBP12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 ZNF20P17024 532 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 PRKACGP22612 351 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 IL3RAP26951 378 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms