RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 IGLV3-16A0A075B6K0 115 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 A0A0G2JLM5 398 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 GLYATL1P3A0A0U1RQE8 302 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TINCRA0A1B0GVN0 87 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 OR5H14A6NHG9 310 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 CLDN24A6NM45 220 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SEC14L6B5MCN3 397 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TRAPPC2LH3BP13 241 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 ERI3O43414 337 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 SYNGR1O43759 233 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SSNA1O43805 119 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 PDE6DO43924 150 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 EIF4E2O60573 245 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 ENTPD6O75354 484 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SPAG7O75391 227 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SLC22A5O76082 557 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TNFSF15O95150 251 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SLC25A27O95847 323 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 MOSP00540 346 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 OXTP01178 125 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 IFNA1P01562 189 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SHBGP04278 402 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TYMSP04818 313 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 C8GP07360 202 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 CYBAP13498 195 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 UGT2B7P16662 529 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 NELFEP18615 380 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 OMGP23515 440 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 RPS12P25398 132 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 S100A7P31151 101 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 RPL13AP40429 203 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 CRISP1P54107 249 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 DLX1P56177 255 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 CLDN6P56747 220 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 PKIAP61925 76 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TBPL1P62380 186 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 BTN3A2P78410 334 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 EMX1Q04741 257 aaPredicted RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 PRKCDQ05655 676 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 ZNF616Q08AN1 781 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 VGLL4Q14135 290 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SURF2Q15527 256 aaPredicted RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 TAL2Q16559 108 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 PABPC1L2AQ5JQF8 200 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SOHLH1Q5JUK2 328 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 FAM78BQ5VT40 261 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 UGT2A3Q6UWM9 527 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SLC25A48Q6ZT89 311 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 ZNF767PQ75MW2 155 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 GLT6D1Q7Z4J2 308 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 FAM19A1Q7Z5A9 133 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 GALNT10Q86SR1 603 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 CTAGE3PQ8IX95 158 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 GDPD1Q8N9F7 314 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 OR4P4Q8NGL7 312 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 ZNF420Q8TAQ5 688 aaPredicted RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 HAVCR2Q8TDQ0 301 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 Q8WTZ3 238 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TNFAIP8L1Q8WVP5 186 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 S100ZQ8WXG8 99 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 ACOT12Q8WYK0 555 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 CMTM7Q96FZ5 175 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TIMD4Q96H15 378 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 OR8B4Q96RC9 309 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 ZNF382Q96SR6 550 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 GPR22Q99680 433 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 APOL4Q9BPW4 351 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 PDCD10Q9BUL8 212 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 NUDT9Q9BW91 350 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 MROQ9BYG7 248 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 TBL1XR1Q9BZK7 514 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 ARMC7Q9H6L4 198 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 NIPAL2Q9H841 368 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 RDH14Q9HBH5 336 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 FBXO6Q9NRD1 293 aaPredicted RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 TAS2R13Q9NYV9 303 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 SLC25A37Q9NYZ2 338 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 PSG8Q9UQ74 426 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 RCL1Q9Y2P8 373 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 KIAA0586Q9BVV6 1533 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 KDM5AP29375 1690 aaKnown RBP2.91□□□□□ -1.94
NUP88-208ENST00000574087 SHPRHQ149N8 1683 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 MAST1Q9Y2H9 1570 aa2.91□□□□□ -1.94
NUP88-208ENST00000574087 CFTRP13569 1480 aa2.9□□□□□ -1.94
NUP88-208ENST00000574087 ARID1AO14497 2285 aa2.9□□□□□ -1.94
NUP88-208ENST00000574087 SCN2AQ99250 2005 aa2.9□□□□□ -1.94
NUP88-208ENST00000574087 MYH13Q9UKX3 1938 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 ZC3H13Q5T200 1668 aaKnown RBP2.9□□□□□ -1.95
NUP88-208ENST00000574087 CENPVL3A0A0U1RRI6 287 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 ANKRD20A5PA0PJZ0 165 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 F5H6K3 240 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 H3BSA7 217 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 SLC17A3O00476 420 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 MRASO14807 208 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 MBTPS2O43462 519 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 ALOX12BO75342 701 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 DIRAS1O95057 198 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 PTTG1O95997 202 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 GYPCP04921 128 aa2.9□□□□□ -1.95
NUP88-208ENST00000574087 SERPINA7P05543 415 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms