RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TAS2R3Q9NYW6 316 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 CLEC2DQ9UHP7 191 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 UBE2J1Q9Y385 318 aaPredicted RBP6.01□□□□□ -1.45
NUP88-205ENST00000572809 SIRT4Q9Y6E7 314 aaPredicted RBP6.01□□□□□ -1.45
NUP88-205ENST00000572809 SESN1Q9Y6P5 492 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 TRGV10A0A0A0MS01 117 aa6□□□□□ -1.45
NUP88-205ENST00000572809 IGHV2-26A0A0B4J1V2 119 aa6□□□□□ -1.45
NUP88-205ENST00000572809 VGLL3A8MV65 326 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ODF3BA8MYP8 253 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ANKRD65E5RJM6 399 aa6□□□□□ -1.45
NUP88-205ENST00000572809 H0YJX3 145 aa6□□□□□ -1.45
NUP88-205ENST00000572809 SLC33A1O00400 549 aaPredicted RBP6□□□□□ -1.45
NUP88-205ENST00000572809 GABRPO00591 440 aa6□□□□□ -1.45
NUP88-205ENST00000572809 TIMM23O14925 209 aa6□□□□□ -1.45
NUP88-205ENST00000572809 CASQ2O14958 399 aaPredicted RBP6□□□□□ -1.45
NUP88-205ENST00000572809 LALBAP00709 142 aa6□□□□□ -1.45
NUP88-205ENST00000572809 GABRA5P31644 462 aa6□□□□□ -1.45
NUP88-205ENST00000572809 CAPGP40121 348 aa6□□□□□ -1.45
NUP88-205ENST00000572809 RSU1Q15404 277 aa6□□□□□ -1.45
NUP88-205ENST00000572809 PLA1AQ53H76 456 aa6□□□□□ -1.45
NUP88-205ENST00000572809 KRBOX4Q5JUW0 171 aa6□□□□□ -1.45
NUP88-205ENST00000572809 OGFRL1Q5TC84 451 aaPredicted RBP6□□□□□ -1.45
NUP88-205ENST00000572809 MINOS1Q5TGZ0 78 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ELP2Q6IA86 826 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ASPHD2Q6ICH7 369 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ASCL4Q6XD76 172 aa6□□□□□ -1.45
NUP88-205ENST00000572809 RTN4RL2Q86UN3 420 aa6□□□□□ -1.45
NUP88-205ENST00000572809 C8orf59Q8N0T1 100 aaPredicted RBP6□□□□□ -1.45
NUP88-205ENST00000572809 DYNAPQ8N1N2 210 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ABHD12Q8N2K0 398 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ZNF565Q8N9K5 539 aa6□□□□□ -1.45
NUP88-205ENST00000572809 Q8NFD4 153 aa6□□□□□ -1.45
NUP88-205ENST00000572809 OR51T1Q8NGJ9 327 aa6□□□□□ -1.45
NUP88-205ENST00000572809 OR52N1Q8NH53 320 aa6□□□□□ -1.45
NUP88-205ENST00000572809 RPS4Y2Q8TD47 263 aa6□□□□□ -1.45
NUP88-205ENST00000572809 TNFAIP8L1Q8WVP5 186 aa6□□□□□ -1.45
NUP88-205ENST00000572809 RGP1Q92546 391 aaPredicted RBP6□□□□□ -1.45
NUP88-205ENST00000572809 GHSRQ92847 366 aa6□□□□□ -1.45
NUP88-205ENST00000572809 SMIM19Q96E16 107 aa6□□□□□ -1.45
NUP88-205ENST00000572809 S100A13Q99584 98 aa6□□□□□ -1.45
NUP88-205ENST00000572809 CDCA4Q9BXL8 241 aa6□□□□□ -1.45
NUP88-205ENST00000572809 CLEC7AQ9BXN2 247 aa6□□□□□ -1.45
NUP88-205ENST00000572809 BARHL1Q9BZE3 327 aa6□□□□□ -1.45
NUP88-205ENST00000572809 GAL3ST2Q9H3Q3 398 aa6□□□□□ -1.45
NUP88-205ENST00000572809 DCLRE1BQ9H816 532 aa6□□□□□ -1.45
NUP88-205ENST00000572809 TMEM138Q9NPI0 162 aa6□□□□□ -1.45
NUP88-205ENST00000572809 PLCXD1Q9NUJ7 323 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ING3Q9NXR8 418 aa6□□□□□ -1.45
NUP88-205ENST00000572809 TAS2R4Q9NYW5 299 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ING4Q9UNL4 249 aa6□□□□□ -1.45
NUP88-205ENST00000572809 HILPDAQ9Y5L2 63 aa6□□□□□ -1.45
NUP88-205ENST00000572809 MINOS1-NBL1R4GNA1 71 aa6□□□□□ -1.45
NUP88-205ENST00000572809 ODAMA1E959 279 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 EFCAB10A6NFE3 127 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 H3BUI4 141 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 M0QZ24 198 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 XPNPEP2O43895 674 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 GPX5O75715 221 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 MMP23AO75900 390 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 CDRT1O95170 752 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 CSTBP04080 98 aaKnown RBP5.99□□□□□ -1.45
NUP88-205ENST00000572809 CSN2P05814 226 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 GNAO1P09471 354 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 CDK2P24941 298 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 HTR1DP28221 377 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 C21orf33P30042 268 aaPredicted RBP5.99□□□□□ -1.45
NUP88-205ENST00000572809 BDKRB2P30411 391 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 ZNF93P35789 620 aaPredicted RBP5.99□□□□□ -1.45
NUP88-205ENST00000572809 PTGFRP43088 359 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 DYNLT3P51808 116 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 KRTAP10-2P60368 255 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 PPP3R1P63098 170 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 SLC34A1Q06495 639 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 Q499Y3 187 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 YIF1BQ5BJH7 314 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 LDLRAD2Q5SZI1 272 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 DMKNQ6E0U4 476 aaPredicted RBP5.99□□□□□ -1.45
NUP88-205ENST00000572809 LAIR2Q6ISS4 152 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 CCBE1Q6UXH8 406 aaPredicted RBP5.99□□□□□ -1.45
NUP88-205ENST00000572809 HEPN1Q6WQI6 88 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 STX19Q8N4C7 294 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 ZNF485Q8NCK3 441 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 BPIFB6Q8NFQ5 453 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 OR4D6Q8NGJ1 314 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 OR4C13Q8NGP0 309 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 OR10K1Q8NGX5 313 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 OR2T6Q8NHC8 308 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 NDNFQ8TB73 568 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 ORAI1Q96D31 301 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 COQ2Q96H96 371 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 FAM192AQ9GZU8 254 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 METTL9Q9H1A3 318 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 VCXQ9H320 206 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 RANBP3Q9H6Z4 567 aaPredicted RBP5.99□□□□□ -1.45
NUP88-205ENST00000572809 PCDHB16Q9NRJ7 776 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 CNOT2Q9NZN8 540 aaKnown RBP5.99□□□□□ -1.45
NUP88-205ENST00000572809 OR6C3Q9NZP0 311 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 DPM3Q9P2X0 92 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 PSORS1C1Q9UIG5 152 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 PITPNC1Q9UKF7 332 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms