RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 FAM172BPA6NC97 362 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 CD34P28906 385 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 SRSF4Q08170 494 aaKnown RBP16.26■□□□□ 0.19
NUP88-204ENST00000572290 BRICD5Q6PL45 260 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 MRPS24Q96EL2 167 aaKnown RBP16.26■□□□□ 0.19
NUP88-204ENST00000572290 UQCC2Q9BRT2 126 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 ZNF696Q9H7X3 374 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 ZNF286AQ9HBT8 521 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 DPM3Q9P2X0 92 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 TCF19Q9Y242 345 aa16.26■□□□□ 0.19
NUP88-204ENST00000572290 A0A087X0M5 115 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 A0A1B0GX30 115 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 TOR1AO14656 332 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 IL1AP01583 271 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 IGLV1-47P01700 117 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 HSMCR30P0CW71 290 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 NFYBP25208 207 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 DYNLT3P51808 116 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 GP2P55259 537 aaKnown RBP16.25■□□□□ 0.19
NUP88-204ENST00000572290 FAM27D1Q5T7N8 215 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 LIPKQ5VXJ0 399 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 PRSS48Q7RTY5 328 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 CEACAM19Q7Z692 300 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 OR4C13Q8NGP0 309 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 MRGPRDQ8TDS7 321 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 KIRREL1Q96J84 757 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 SPACA1Q9HBV2 294 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 ISYNA1Q9NPH2 558 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 PITPNC1Q9UKF7 332 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 RAB26Q9ULW5 256 aa16.25■□□□□ 0.19
NUP88-204ENST00000572290 TMEM30CPA0ZSE6 113 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 A6NDX4 124 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 CHST1O43916 411 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 GABRA5P31644 462 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 PRRX1P54821 245 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 KRTAP10-3P60369 221 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 TPBGQ13641 420 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 HSD17B12Q53GQ0 312 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 RBM48Q5RL73 367 aaKnown RBP16.24■□□□□ 0.19
NUP88-204ENST00000572290 PRR31Q5SQ13 230 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 NEK7Q8TDX7 302 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 PHYHIPQ92561 330 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 CITED1Q99966 193 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 NPFFR1Q9GZQ6 430 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 RANBP3Q9H6Z4 567 aaPredicted RBP16.24■□□□□ 0.19
NUP88-204ENST00000572290 LINC00574Q9H8X3 128 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 IDI2-AS1Q9NZ38 188 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 FBLN5Q9UBX5 448 aa16.24■□□□□ 0.19
NUP88-204ENST00000572290 TRAV39A0A0B4J263 110 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 LEUTXA8MZ59 168 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 NPIPB11E5RHQ5 1161 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 F2RL2O00254 374 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 CRTAPO75718 401 aaPredicted RBP16.23■□□□□ 0.19
NUP88-204ENST00000572290 SC5DO75845 299 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 JUNBP17275 347 aaPredicted RBP16.23■□□□□ 0.19
NUP88-204ENST00000572290 VHLP40337 213 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 KIR2DS4P43632 304 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 HLA-DRB5Q30154 266 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 GLT8D1Q68CQ7 371 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 CCBE1Q6UXH8 406 aaPredicted RBP16.23■□□□□ 0.19
NUP88-204ENST00000572290 LRRTM1Q86UE6 522 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 TMEM203Q969S6 136 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 CREB3L1Q96BA8 519 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 SELENOIQ9C0D9 397 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 BANF2Q9H503 90 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 RCC2Q9P258 522 aaKnown RBP16.23■□□□□ 0.19
NUP88-204ENST00000572290 GHRLQ9UBU3 117 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 BLOC1S6Q9UL45 172 aa16.23■□□□□ 0.19
NUP88-204ENST00000572290 UCHL1P09936 223 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 MGMTP16455 207 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 GZMHP20718 246 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 CEACAM3P40198 252 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 MAP2K4P45985 399 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 MLLT11Q13015 90 aaPredicted RBP16.22■□□□□ 0.19
NUP88-204ENST00000572290 LTC4SQ16873 150 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 TMEM219Q86XT9 240 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 DTX3Q8N9I9 347 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 TMEM104Q8NE00 496 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 OR10A7Q8NGE5 316 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 OR9G1Q8NH87 305 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 RFESDQ8TAC1 157 aa16.22■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A10PA6NDY2 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A18PA6NE21 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A16PA6NEW6 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A20PA6NIJ5 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A7PA6NKC0 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A22PA8MWA6 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A12PA8MX19 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A5PA8MXJ8 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A23PA8MXZ1 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 MCRIP1C9JLW8 97 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 BUB1B-PAK6H3BSN5 160 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A15PP0C7V4 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A13PP0C7W8 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A14PP0C7W9 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 FAM90A24PP0C7X0 464 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 SRMP19623 302 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 SSTR5P35346 364 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 RBM39Q14498 530 aaKnown RBP16.21■□□□□ 0.19
NUP88-204ENST00000572290 TRAM1Q15629 374 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms