RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 C1orf229Q6ZS94 237 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-224ENST00000568877 TRAPPC6BQ86SZ2 158 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 DYRK2Q92630 601 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 RAB3CQ96E17 227 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 ZNF714Q96N38 554 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 PECRQ9BY49 303 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 SIRPDQ9H106 197 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 OR6C3Q9NZP0 311 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 COMMD3Q9UBI1 195 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 F8P00451 2351 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 ZNF728P0DKX0 622 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 DLX6P56179 175 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 UBE2NLQ5JXB2 153 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 MZT2AQ6P582 158 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 C1orf122Q6ZSJ8 110 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 GAPTQ8N292 157 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 Q8N7P7 452 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 SAMD12Q8N8I0 201 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 ZNF565Q8N9K5 539 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 PCGF1Q9BSM1 259 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 ABCG5Q9H222 651 aa13.76□□□□□ -0.21
COMMD4-224ENST00000568877 CCDC59Q9P031 241 aaKnown RBP13.76□□□□□ -0.21
COMMD4-224ENST00000568877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.76□□□□□ -0.214e-11■■■■□ 22.8
COMMD4-224ENST00000568877 DOCK11Q5JSL3 2073 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 A0A1W2PR64 198 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 C17orf98A8MV24 154 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 HIST1H1DP16402 221 aaKnown RBP13.75□□□□□ -0.21
COMMD4-224ENST00000568877 GNB3P16520 340 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 C11orf42Q8N5U0 333 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 TEX29Q8N6K0 151 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 OR13A1Q8NGR1 328 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 CCDC107Q8WV48 283 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 PHF21AQ96BD5 680 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 UPRTQ96BW1 309 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 DGCR14Q96DF8 476 aaKnown RBP13.75□□□□□ -0.21
COMMD4-224ENST00000568877 CMTM3Q96MX0 182 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 TBX15Q96SF7 602 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 METTL8Q9H825 291 aaKnown RBP13.75□□□□□ -0.21
COMMD4-224ENST00000568877 TAS2R3Q9NYW6 316 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 AK3Q9UIJ7 227 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 KCNK7Q9Y2U2 307 aa13.75□□□□□ -0.21
COMMD4-224ENST00000568877 CSPG4Q6UVK1 2322 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 A0A0A6YYH2 397 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 TRAV39A0A0B4J263 110 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 A6NJ64 397 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 INAFM1C9JVW0 142 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 MFNGO00587 321 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 RBP4P02753 201 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 CGB3P0DN86 165 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 CGB7P0DN87 165 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 HNF1AP20823 631 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 GLP1RP43220 463 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 ARL6IP1Q15041 203 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 VMO1Q7Z5L0 202 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 OR4K15Q8NH41 348 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 MRPL30Q8TCC3 161 aaKnown RBP13.74□□□□□ -0.21
COMMD4-224ENST00000568877 MRGPRDQ8TDS7 321 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 S100A16Q96FQ6 103 aaKnown RBP13.74□□□□□ -0.21
COMMD4-224ENST00000568877 GAL3ST2Q9H3Q3 398 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 ZMAT3Q9HA38 289 aaKnown RBP13.74□□□□□ -0.21
COMMD4-224ENST00000568877 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 TRAPPC2LQ9UL33 140 aa13.74□□□□□ -0.21
COMMD4-224ENST00000568877 A0A075B6Q4 140 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 ZNF729A6NN14 1252 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-224ENST00000568877 HPGDSO60760 199 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 NAPSAO96009 420 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 APOA1P02647 267 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 GZMHP20718 246 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 PRTN3P24158 256 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 ERVFRD-1P60508 538 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 C17orf58Q2M2W7 97 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 CDNFQ49AH0 187 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 OLFML2AQ68BL7 652 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 IL17RELQ6ZVW7 336 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 NANPQ8TBE9 248 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 CMSS1Q9BQ75 279 aaKnown RBP13.73□□□□□ -0.21
COMMD4-224ENST00000568877 DCUN1D5Q9BTE7 237 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 SLIRPQ9GZT3 109 aaKnown RBP13.73□□□□□ -0.21
COMMD4-224ENST00000568877 RIMS4Q9H426 269 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-224ENST00000568877 UNKLQ9H9P5 680 aaKnown RBP13.73□□□□□ -0.21
COMMD4-224ENST00000568877 CHMP1AQ9HD42 196 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-224ENST00000568877 SIRT7Q9NRC8 400 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 CDC42EP3Q9UKI2 254 aa13.73□□□□□ -0.21
COMMD4-224ENST00000568877 TRAV18A0A075B6X5 111 aa13.72□□□□□ -0.21
COMMD4-224ENST00000568877 KBTBD11-OT1A0A1B0GTJ5 212 aa13.72□□□□□ -0.21
COMMD4-224ENST00000568877 SERPINE3A8MV23 424 aa13.72□□□□□ -0.21
COMMD4-224ENST00000568877 EIF4EP06730 217 aaKnown RBP13.72□□□□□ -0.21
COMMD4-224ENST00000568877 GSTP1P09211 210 aaKnown RBP13.72□□□□□ -0.21
COMMD4-224ENST00000568877 CDK2P24941 298 aa13.72□□□□□ -0.21
COMMD4-224ENST00000568877 ZNF260Q3ZCT1 412 aa13.72□□□□□ -0.21
COMMD4-224ENST00000568877 HDHD3Q9BSH5 251 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-224ENST00000568877 BEX2Q9BXY8 128 aa13.72□□□□□ -0.21
COMMD4-224ENST00000568877 C12orf4Q9NQ89 552 aa13.72□□□□□ -0.21
COMMD4-224ENST00000568877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.72□□□□□ -0.21
COMMD4-224ENST00000568877 MBNL3Q9NUK0 354 aaKnown RBP13.72□□□□□ -0.21
COMMD4-224ENST00000568877 CALYQ9NYX4 217 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms