RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ZNF93P35789 620 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-209ENST00000567635 OR3A4PP47883 348 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 ALDH3B2P48448 385 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 BDH1Q02338 343 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 IL13RA2Q14627 380 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 ATXN7L3Q14CW9 347 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-209ENST00000567635 HERPUD1Q15011 391 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 PIGYQ3MUY2 71 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 PAN3Q58A45 887 aaKnown RBP5.57□□□□□ -1.52
SF3B3-209ENST00000567635 DDI2Q5TDH0 399 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 PRAMEF5Q5TYX0 476 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 BAIAP2L2Q6UXY1 529 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 Q6ZTK2 550 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 TMEM219Q86XT9 240 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 Q8N2B8 174 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 OSR2Q8N2R0 312 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 STX19Q8N4C7 294 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 ZNF485Q8NCK3 441 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 OR10K1Q8NGX5 313 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 ZNF596Q8TC21 504 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 CREB3L1Q96BA8 519 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 SMIM19Q96E16 107 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 PRSS22Q9GZN4 317 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 MMP27Q9H306 513 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 PAK1IP1Q9NWT1 392 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-209ENST00000567635 IL36GQ9NZH8 169 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 CNOT2Q9NZN8 540 aaKnown RBP5.57□□□□□ -1.52
SF3B3-209ENST00000567635 CKLFQ9UBR5 152 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 PSORS1C1Q9UIG5 152 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 KIF25Q9UIL4 384 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 TCF19Q9Y242 345 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 TPRKBQ9Y3C4 175 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 TRRAPQ9Y4A5 3859 aa5.57□□□□□ -1.52
SF3B3-209ENST00000567635 MEIKINA0A087WXM9 373 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 A0A087X0M5 115 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 TRBV5-7A0A0A0MS05 114 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 TRBV5-5A0A0J9YX44 114 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 A0A1B0GX30 115 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 MEGF11A6BM72 1044 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 CCDC160A6NGH7 325 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 BUB1B-PAK6H3BSN5 160 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 BOLA2-SMG1P6H3BVE0 249 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 HSPB6O14558 160 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 XPNPEP2O43895 674 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ZNF780AO75290 641 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 IGLV1-47P01700 117 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 CSF1P09603 554 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 GSTT2P0CG29 244 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 GSTT2BP0CG30 244 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 VSIG10L2P0DP72 767 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 JUNBP17275 347 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 IGFBP3P17936 291 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 GZMHP20718 246 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 NFYBP25208 207 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 GDNFP39905 211 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 CEACAM3P40198 252 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 KCNJ3P48549 501 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ARHGDIBP52566 201 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 RBM11P57052 281 aaKnown RBP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 TAS2R43P59537 309 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 GABARAPL2P60520 117 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 RPS11P62280 158 aaKnown RBP eCLIP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 PAX5Q02548 391 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 GPR176Q14439 515 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 C17orf58Q2M2W7 97 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 C2orf68Q2NKX9 166 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 Q499Y3 187 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 YIF1BQ5BJH7 314 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 NHLRC3Q5JS37 347 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 KLHDC1Q8N7A1 406 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ZFP41Q8N8Y5 198 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 SUMF2Q8NBJ7 301 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 BPIFB6Q8NFQ5 453 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 OR4P4Q8NGL7 312 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 OR13C5Q8NGS8 318 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 FAM110DQ8TAY7 271 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 CFHR4Q92496 578 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ORAI1Q96D31 301 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 DPCDQ9BVM2 203 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 PPIL3Q9H2H8 161 aaKnown RBP5.56□□□□□ -1.52
SF3B3-209ENST00000567635 DUSP21Q9H596 190 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 IFT22Q9H7X7 185 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 LINC00574Q9H8X3 128 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ZNF702PQ9H963 129 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ZNF286AQ9HBT8 521 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 PALMDQ9NP74 551 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 SCN3BQ9NY72 215 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 FOXJ3Q9UPW0 622 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ST3GAL6Q9Y274 331 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 ERGIC3Q9Y282 383 aa5.56□□□□□ -1.52
SF3B3-209ENST00000567635 TRAV8-7A0A075B6U6 113 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 PNMA8CA0A1B0GUJ8 204 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 A0A1W2PPK0 400 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 FAM172BPA6NC97 362 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 OOSP1A8MZH6 123 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 PTGES3LE9PB15 166 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 LY6LH3BQJ8 138 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 GEMIN2O14893 280 aaKnown RBP5.55□□□□□ -1.52
SF3B3-209ENST00000567635 WIPF1O43516 503 aa5.55□□□□□ -1.52
SF3B3-209ENST00000567635 PEX14O75381 377 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms