RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 RPL35P42766 123 aaKnown RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 CEACAM21Q3KPI0 293 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 AWAT1Q58HT5 328 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 IGSF11Q5DX21 431 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 TBC1D26Q86UD7 250 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF695Q8IW36 515 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 MKXQ8IYA7 352 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 SELENOHQ8IZQ5 122 aaKnown RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF565Q8N9K5 539 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 HIST1H2BAQ96A08 127 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 C14orf79Q96F83 325 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 PAPOLGQ9BWT3 736 aaKnown RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 HES7Q9BYE0 225 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 EIF5A2Q9GZV4 153 aaKnown RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 HIPK2Q9H2X6 1198 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 PLK3Q9H4B4 646 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF552Q9H707 407 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 RPS10P5Q9NQ39 176 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 SLC7A10Q9NS82 523 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 LYRM2Q9NU23 88 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 UBE2J1Q9Y385 318 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 CEP250Q9BV73 2442 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 C7orf77A4D0Y5 90 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 NKX2-6A6NCS4 301 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 NKX2-8O15522 239 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 SS18L1O75177 396 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 CD46P15529 392 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 RAB1AP62820 205 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 BAXQ07812 192 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 PRDX4Q13162 271 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 HABP2Q14520 560 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 CLEC9AQ6UXN8 241 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 MEX3BQ6ZN04 569 aaKnown RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 ZDHHC23Q8IYP9 409 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF561Q8N587 486 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 OR56B2PQ8NGI1 322 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 OR1J1Q8NGS3 322 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 APOBEC3DQ96AK3 386 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 CLCC1Q96S66 551 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 C12orf57Q99622 126 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 TTTY12Q9BZ98 90 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 SPACA1Q9HBV2 294 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 RTTNQ86VV8 2226 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 TNRC6AQ8NDV7 1962 aaKnown RBP14.35□□□□□ -0.11
CMTM3-213ENST00000566756 TRBV6-6A0A0A6YYG2 114 aa14.35□□□□□ -0.11
CMTM3-213ENST00000566756 WNT2P09544 360 aa14.35□□□□□ -0.11
CMTM3-213ENST00000566756 VDAC1P21796 283 aa14.35□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF845Q96IR2 970 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-213ENST00000566756 SH3BGRL3Q9H299 93 aa14.35□□□□□ -0.11
CMTM3-213ENST00000566756 ATP23Q9Y6H3 246 aa14.35□□□□□ -0.11
CMTM3-213ENST00000566756 CUL9Q8IWT3 2517 aa14.35□□□□□ -0.11
CMTM3-213ENST00000566756 HSPA12AO43301 675 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 BCL3P20749 454 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 ARF1P84077 181 aaKnown RBP14.34□□□□□ -0.11
CMTM3-213ENST00000566756 NMSQ5H8A3 153 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 ZFP62Q8NB50 900 aaPredicted RBP14.34□□□□□ -0.11
CMTM3-213ENST00000566756 HSD17B11Q8NBQ5 300 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 NAXEQ8NCW5 288 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 OR5A2Q8NGI9 324 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 MALSU1Q96EH3 234 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 PARP12Q9H0J9 701 aaKnown RBP14.34□□□□□ -0.11
CMTM3-213ENST00000566756 UNKLQ9H9P5 680 aaKnown RBP14.34□□□□□ -0.11
CMTM3-213ENST00000566756 KCNJ16Q9NPI9 418 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 AGAP20933 346 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 MAS1LP35410 378 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 MEOX2P50222 304 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 CTAG1AP78358 180 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 ID3Q02535 119 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 SRSF6Q13247 344 aaKnown RBP14.34□□□□□ -0.11
CMTM3-213ENST00000566756 CLN3Q13286 438 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 OR8G1Q15617 311 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 MRPL21Q7Z2W9 205 aaKnown RBP14.34□□□□□ -0.11
CMTM3-213ENST00000566756 TMEM251Q8N6I4 163 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 OR5D13Q8NGL4 314 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 GNPNAT1Q96EK6 184 aaPredicted RBP14.34□□□□□ -0.11
CMTM3-213ENST00000566756 LHX6Q9UPM6 363 aa14.34□□□□□ -0.11
CMTM3-213ENST00000566756 DMXL1Q9Y485 3027 aa14.33□□□□□ -0.11
CMTM3-213ENST00000566756 IGSF23A1L1A6 192 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 SLC22A20A6NK97 555 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF724A8MTY0 619 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF732B4DXR9 585 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 H0Y980 276 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 GLI4P10075 376 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 SLC25A6P12236 298 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF44P15621 663 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 WT1P19544 449 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-213ENST00000566756 S100GP29377 79 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 HAAOP46952 286 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 MEOX1P50221 254 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 LHX2P50458 406 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 PDCD1Q15116 288 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 IGFL2Q6UWQ7 119 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 CMTM1Q8IZ96 169 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 TMEM252Q8N6L7 170 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 TMEM178AQ8NBL3 297 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 SLAMF9Q96A28 289 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 FAM24AA6NFZ4 105 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 TRAPPC2LH3BP13 241 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 S100A8P05109 93 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 ARR3P36575 388 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms