RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KLHL22Q53GT1 634 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 KHDC1LQ5JSQ8 128 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 VAX1Q5SQQ9 334 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 RSBN1Q5VWQ0 802 aaPredicted RBP11.88□□□□□ -0.51
RNF40-209ENST00000566703 CBR4Q8N4T8 237 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 TNFAIP8L1Q8WVP5 186 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 TSEN15Q8WW01 171 aaKnown RBP11.88□□□□□ -0.51
RNF40-209ENST00000566703 GPER1Q99527 375 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 PDCD1LG2Q9BQ51 273 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
RNF40-209ENST00000566703 IFT22Q9H7X7 185 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 AASSQ9UDR5 926 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 RPL36Q9Y3U8 105 aaKnown RBP11.88□□□□□ -0.51
RNF40-209ENST00000566703 H3BNX3 289 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 GABRPO00591 440 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 HSPB6O14558 160 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 CD2P06729 351 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 MYCNOSP40205 109 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 THBS3P49746 956 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 RPL23AP62750 156 aaKnown RBP11.87□□□□□ -0.51
RNF40-209ENST00000566703 SLC35B1P78383 322 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 EBI3Q14213 229 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 RSU1Q15404 277 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 ZSCAN26Q16670 478 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 CCDC58Q4VC31 144 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 DEFB121Q5J5C9 76 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 NHLRC3Q5JS37 347 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 SATL1Q86VE3 508 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 MRPL41Q8IXM3 137 aaKnown RBP11.87□□□□□ -0.51
RNF40-209ENST00000566703 OR52M1Q8NGK5 317 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 OR52I1Q8NGK6 324 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 GPR148Q8TDV2 347 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 DPF1Q92782 380 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 JAM3Q9BX67 310 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 FAM118AQ9NWS6 357 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 IL36GQ9NZH8 169 aa11.87□□□□□ -0.51
RNF40-209ENST00000566703 ZMAT5Q9UDW3 170 aaKnown RBP11.87□□□□□ -0.51
RNF40-209ENST00000566703 IGHG2P01859 326 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 GAPDHP04406 335 aaKnown RBP11.86□□□□□ -0.51
RNF40-209ENST00000566703 KRTAP10-11P60412 298 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 ZNF816Q0VGE8 651 aaPredicted RBP11.86□□□□□ -0.51
RNF40-209ENST00000566703 HES1Q14469 280 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 RPL22L1Q6P5R6 122 aaKnown RBP11.86□□□□□ -0.51
RNF40-209ENST00000566703 LINC00596Q86U02 117 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 ZNF329Q86UD4 541 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 OR51A2Q8NGJ7 313 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 RFESDQ8TAC1 157 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 MRGPRDQ8TDS7 321 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 C9orf16Q9BUW7 83 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 DPCDQ9BVM2 203 aaPredicted RBP11.86□□□□□ -0.51
RNF40-209ENST00000566703 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 TMEM138Q9NPI0 162 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 PAK1IP1Q9NWT1 392 aaPredicted RBP11.86□□□□□ -0.51
RNF40-209ENST00000566703 ST3GAL6Q9Y274 331 aa11.86□□□□□ -0.51
RNF40-209ENST00000566703 LOC100130705A0A1B0GUX0 176 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 SERPINE3A8MV23 424 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 CCRL2O00421 344 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 HTR3BO95264 441 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 DCTN2Q13561 401 aaKnown RBP11.85□□□□□ -0.51
RNF40-209ENST00000566703 PIGYQ3MUY2 71 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 LPCAT4Q643R3 524 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 ETV3LQ6ZN32 361 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 OR2W3Q7Z3T1 314 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 SLC35E3Q7Z769 313 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 FOXRED2Q8IWF2 684 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 LINC00311Q8N616 119 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 SUMF2Q8NBJ7 301 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 OR52N1Q8NH53 320 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 LEAP2Q969E1 77 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
RNF40-209ENST00000566703 FGF20Q9NP95 211 aaPredicted RBP11.85□□□□□ -0.51
RNF40-209ENST00000566703 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 ZNF780AO75290 641 aaPredicted RBP11.84□□□□□ -0.51
RNF40-209ENST00000566703 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 IGHV3-7P01780 117 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 CSTBP04080 98 aaKnown RBP11.84□□□□□ -0.51
RNF40-209ENST00000566703 LIMS3P0CW19 117 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 LIMS4P0CW20 117 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 SSTR5P35346 364 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 SOX2P48431 317 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 GTF2A1P52655 376 aaPredicted RBP11.84□□□□□ -0.51
RNF40-209ENST00000566703 GP2P55259 537 aaKnown RBP11.84□□□□□ -0.51
RNF40-209ENST00000566703 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 HNF4GQ14541 408 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 LTC4SQ16873 150 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 MPV17LQ2QL34 196 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 Q3ZCU0 254 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 OR10K1Q8NGX5 313 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 RGP1Q92546 391 aaPredicted RBP11.84□□□□□ -0.51
RNF40-209ENST00000566703 NOL4LQ96MY1 436 aaPredicted RBP11.84□□□□□ -0.51
RNF40-209ENST00000566703 P2RX4Q99571 388 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 GON7Q9BXV9 100 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms