RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 METTL9Q9H1A3 318 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 IFT22Q9H7X7 185 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 FKBP14Q9NWM8 211 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
FANCA-220ENST00000566409 CALYQ9NYX4 217 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 CNOT2Q9NZN8 540 aaKnown RBP11.73□□□□□ -0.53
FANCA-220ENST00000566409 NKX1-2Q9UD57 310 aaPredicted RBP11.73□□□□□ -0.53
FANCA-220ENST00000566409 PNMA8CA0A1B0GUJ8 204 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 LEUTXA8MZ59 168 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 PIN1P1O15428 100 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 IGHV3-7P01780 117 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 CD28P10747 220 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 SERPINA2P20848 420 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 NFYBP25208 207 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 PDLIM3Q53GG5 364 aaPredicted RBP11.72□□□□□ -0.53
FANCA-220ENST00000566409 TPTE2P1Q5T6R2 138 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 AHSA2Q719I0 299 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 LYPD6Q86Y78 171 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 OSR2Q8N2R0 312 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 BPIFB6Q8NFQ5 453 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 MRGPRDQ8TDS7 321 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 TFAP2CQ92754 450 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 OR5M11Q96RB7 305 aa11.72□□□□□ -0.53
FANCA-220ENST00000566409 DNAH3Q8TD57 4116 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 ADARB2-AS1A8MUL3 147 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 TOR1AO14656 332 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 OR7C1O76099 320 aaPredicted RBP11.71□□□□□ -0.53
FANCA-220ENST00000566409 IL1AP01583 271 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 AMY1AP04745 511 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 AMY2AP04746 511 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 FSTP19883 344 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 SSTR5P35346 364 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 KCNJ3P48549 501 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 PRRX1P54821 245 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 DIAPH2-AS1Q14236 149 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 RBM39Q14498 530 aaKnown RBP11.71□□□□□ -0.53
FANCA-220ENST00000566409 SLC22A6Q4U2R8 563 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 DTX3Q8N9I9 347 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 OR9G1Q8NH87 305 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 CYYR1Q96J86 154 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 DERL3Q96Q80 235 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 MMP28Q9H239 520 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 IDI2-AS1Q9NZ38 188 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 PSG11Q9UQ72 335 aa11.71□□□□□ -0.53
FANCA-220ENST00000566409 J3QR06 171 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 CSTBP04080 98 aaKnown RBP11.7□□□□□ -0.54
FANCA-220ENST00000566409 CELP19835 753 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 BRS3P32247 399 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 GP2P55259 537 aaKnown RBP11.7□□□□□ -0.54
FANCA-220ENST00000566409 WNT4P56705 351 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 MED21Q13503 144 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 LTC4SQ16873 150 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
FANCA-220ENST00000566409 C1QL4Q86Z23 238 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 STX19Q8N4C7 294 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 NRG4Q8WWG1 115 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 SGCDQ92629 289 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 MUL1Q969V5 352 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 LIN7BQ9HAP6 207 aa11.7□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A18PA6NE21 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A16PA6NEW6 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A20PA6NIJ5 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A9PA6NNJ1 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A12PA8MX19 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A5PA8MXJ8 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 C15orf65H3BRN8 121 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FBXO24O75426 580 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 MAS1P04201 325 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 CD1AP06126 327 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A15PP0C7V4 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A13PP0C7W8 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A14PP0C7W9 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 FAM90A24PP0C7X0 464 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 CEACAM3P40198 252 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 TAS2R43P59537 309 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 INSL4Q14641 139 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 CREB3L1Q96BA8 519 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 RBM14Q96PK6 669 aaKnown RBP11.69□□□□□ -0.54
FANCA-220ENST00000566409 S100A13Q99584 98 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 CITED2Q99967 270 aaPredicted RBP11.69□□□□□ -0.54
FANCA-220ENST00000566409 SLC25A33Q9BSK2 321 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 PAK1IP1Q9NWT1 392 aaPredicted RBP11.69□□□□□ -0.54
FANCA-220ENST00000566409 CKLFQ9UBR5 152 aa11.69□□□□□ -0.54
FANCA-220ENST00000566409 MRPS28Q9Y2Q9 187 aaKnown RBP11.69□□□□□ -0.54
FANCA-220ENST00000566409 A0A1W2PPE3 182 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 A0A1W2PPI3 338 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 OOSP1A8MZH6 123 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 ZNF780AO75290 641 aaPredicted RBP11.68□□□□□ -0.54
FANCA-220ENST00000566409 OR2F2O95006 317 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 MT-ND4P03905 459 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 OPN1MWP04001 364 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 CDK1P06493 297 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 OPN1MW2P0DN77 364 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 OPN1MW3P0DN78 364 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 GTF2F2P13984 249 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 VDAC2P45880 294 aaPredicted RBP11.68□□□□□ -0.54
FANCA-220ENST00000566409 MPV17LQ2QL34 196 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms