RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 Q6P435 159 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 UXS1Q8NBZ7 420 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 MOB3AQ96BX8 217 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 RTBDNQ9BSG5 229 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-210ENST00000566290 HDHD3Q9BSH5 251 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-210ENST00000566290 OR51B6Q9H340 312 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 ZNF581Q9P0T4 197 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 C14orf166Q9Y224 244 aaKnown RBP14.2□□□□□ -0.14
RAB40C-210ENST00000566290 ATP23Q9Y6H3 246 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 OR5H14A6NHG9 310 aa14.19□□□□□ -0.14
RAB40C-210ENST00000566290 TIMM8AO60220 97 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-210ENST00000566290 ALKBH6Q3KRA9 238 aa14.19□□□□□ -0.14
RAB40C-210ENST00000566290 DMRTC2Q8IXT2 367 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-210ENST00000566290 GRPEL2Q8TAA5 225 aa14.19□□□□□ -0.14
RAB40C-210ENST00000566290 TMEM246Q9BRR3 403 aa14.19□□□□□ -0.14
RAB40C-210ENST00000566290 CLEC4MQ9H2X3 399 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-210ENST00000566290 RAB18Q9NP72 206 aa14.19□□□□□ -0.14
RAB40C-210ENST00000566290 RASL12Q9NYN1 266 aa14.19□□□□□ -0.14
RAB40C-210ENST00000566290 SLC23A1Q9UHI7 598 aa14.19□□□□□ -0.14
RAB40C-210ENST00000566290 AKAP6Q13023 2319 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 TRAV24A0A0B4J272 114 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 PLSCR5A0PG75 271 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 C16orf97H3BN30 126 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 IFNL4K9M1U5 179 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 GOSR2O14653 212 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 PTAFRP25105 342 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 NPY4RP50391 375 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 FBXL19-AS1Q494R0 122 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 Q6ZPA2 131 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 Q6ZR03 302 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 FAM185AQ8N0U4 392 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 SUMF2Q8NBJ7 301 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 OR11H4Q8NGC9 324 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 COQ8AQ8NI60 647 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 GALNT14Q96FL9 552 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 VRK1Q99986 396 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-210ENST00000566290 ZNF2Q9BSG1 426 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-210ENST00000566290 CABLES2Q9BTV7 478 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 DPCDQ9BVM2 203 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-210ENST00000566290 CSPG4Q6UVK1 2322 aa14.18□□□□□ -0.14
RAB40C-210ENST00000566290 DEGS1O15121 323 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 RHBDL1O75783 438 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 TUSC2O75896 110 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 KNG1P01042 644 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 ADH4P08319 380 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 WNT2P09544 360 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 GATA4P43694 442 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 KLF3P57682 345 aaPredicted RBP14.17□□□□□ -0.14
RAB40C-210ENST00000566290 GMFBP60983 142 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 SUPT4H1P63272 117 aaKnown RBP14.17□□□□□ -0.14
RAB40C-210ENST00000566290 CYCSP99999 105 aaKnown RBP14.17□□□□□ -0.14
RAB40C-210ENST00000566290 TMEM65Q6PI78 240 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 SLC22A25Q6T423 547 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 TMEM108Q6UXF1 575 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 C17orf107Q6ZR85 190 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 ZNF767PQ75MW2 155 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 C11orf53Q8IXP5 236 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 SLC38A6Q8IZM9 456 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 ADAD2Q8NCV1 583 aaKnown RBP14.17□□□□□ -0.14
RAB40C-210ENST00000566290 OR4A4PQ8NGN8 299 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 MRPL30Q8TCC3 161 aaKnown RBP14.17□□□□□ -0.14
RAB40C-210ENST00000566290 TMEM171Q8WVE6 324 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 MAFIPQ8WZ33 124 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 NRGNQ92686 78 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 CYYR1Q96J86 154 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 HS3ST6Q96QI5 342 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 FXYD6Q9H0Q3 95 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 GLS2Q9UI32 602 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 PCDHB10Q9UN67 800 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 HSPB11Q9Y547 144 aa14.17□□□□□ -0.14
RAB40C-210ENST00000566290 FLNAP21333 2647 aaKnown RBP14.16□□□□□ -0.14
RAB40C-210ENST00000566290 CRYM-AS1A6NIL9 109 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 RFPL4AA6NLU0 287 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 TRDCB7Z8K6 153 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 EEF1E1-BLOC1S5C9J1V9 151 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 RFPL4AL1F8VTS6 287 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 SDCBPO00560 298 aaPredicted RBP14.16□□□□□ -0.14
RAB40C-210ENST00000566290 SH2D1BO14796 132 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 CD40P25942 277 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 ASCL1P50553 236 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 ZNF83P51522 516 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 RND3P61587 244 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 C2orf68Q2NKX9 166 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 LILRB1Q8NHL6 650 aaPredicted RBP14.16□□□□□ -0.14
RAB40C-210ENST00000566290 C1QTNF6Q9BXI9 259 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 WDR13Q9H1Z4 485 aa14.16□□□□□ -0.14
RAB40C-210ENST00000566290 MBNL3Q9NUK0 354 aaKnown RBP14.16□□□□□ -0.14
RAB40C-210ENST00000566290 SMLR1H3BR10 107 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 M0R1B8 84 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 CDIPTO14735 213 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 NXPH2O95156 264 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 SLC25A4P12235 298 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 RPA2P15927 270 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 VAMP1P23763 118 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 HLA-DRB3P79483 266 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 Q5BKY6 102 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 WDR82Q6UXN9 313 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 ZNF497Q6ZNH5 498 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 LRTM2Q8N967 370 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 FAM216AQ8WUB2 273 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms