RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 C21orf33P30042 268 aaPredicted RBP12.49□□□□□ -0.41
CDH3-204ENST00000565453 BDKRB2P30411 391 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 ZNF93P35789 620 aaPredicted RBP12.49□□□□□ -0.41
CDH3-204ENST00000565453 ARHGDIBP52566 201 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 RPS11P62280 158 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDH3-204ENST00000565453 PPP3R1P63098 170 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 LRRC36Q1X8D7 754 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 ARSJQ5FYB0 599 aaPredicted RBP12.49□□□□□ -0.41
CDH3-204ENST00000565453 PACRGLQ8N7B6 248 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 ZNF565Q8N9K5 539 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 SUMF2Q8NBJ7 301 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 MRGPRDQ8TDS7 321 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 CYGBQ8WWM9 190 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 GGHQ92820 318 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 GHSRQ92847 366 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 TMEM80Q96HE8 168 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 AKR1E2Q96JD6 320 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 PGLYRP3Q96LB9 341 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 DPCDQ9BVM2 203 aaPredicted RBP12.49□□□□□ -0.41
CDH3-204ENST00000565453 METTL9Q9H1A3 318 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 ING4Q9UNL4 249 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 ST3GAL6Q9Y274 331 aa12.49□□□□□ -0.41
CDH3-204ENST00000565453 MAGEA13PA6NCF6 341 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 PEX14O75381 377 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 MYL12AP19105 171 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 SSTR5P35346 364 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 RBM11P57052 281 aaKnown RBP12.48□□□□□ -0.41
CDH3-204ENST00000565453 RBM39Q14498 530 aaKnown RBP12.48□□□□□ -0.41
CDH3-204ENST00000565453 ABCA11PQ4W5N1 156 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 LAIR2Q6ISS4 152 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 CCDC144NLQ6NUI1 221 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 THNSL2Q86YJ6 484 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 OSR2Q8N2R0 312 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 SETD9Q8NE22 299 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 LEAP2Q969E1 77 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 R3HDM4Q96D70 268 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 PSG11Q9UQ72 335 aa12.48□□□□□ -0.41
CDH3-204ENST00000565453 TRAV8-7A0A075B6U6 113 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 TRBV5-7A0A0A0MS05 114 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 TRAV39A0A0B4J263 110 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 A0A1W2PP11 408 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 A0A1W2PPI3 338 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
CDH3-204ENST00000565453 GEMIN2O14893 280 aaKnown RBP12.47□□□□□ -0.41
CDH3-204ENST00000565453 IGHV3-7P01780 117 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 LPLP06858 475 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 FSTP19883 344 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 MNDAP41218 407 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 RIPK1Q13546 671 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 DOC2BQ14184 412 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 DIAPH2-AS1Q14236 149 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 Q499Y3 187 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 YIF1BQ5BJH7 314 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 SLC16A12Q6ZSM3 486 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 DHRSXQ8N5I4 330 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 ZFP41Q8N8Y5 198 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 OR4F17Q8NGA8 305 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 RFESDQ8TAC1 157 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 TOMM40LQ969M1 308 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 RPEQ96AT9 228 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 OR4F4Q96R69 305 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 ZNF184Q99676 751 aaPredicted RBP12.47□□□□□ -0.41
CDH3-204ENST00000565453 PCDHB16Q9NRJ7 776 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 AMMECR1Q9Y4X0 333 aaPredicted RBP12.47□□□□□ -0.41
CDH3-204ENST00000565453 TGP01266 2768 aa12.47□□□□□ -0.41
CDH3-204ENST00000565453 C15orf65H3BRN8 121 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 XPNPEP2O43895 674 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 OR7C1O76099 320 aaPredicted RBP12.46□□□□□ -0.41
CDH3-204ENST00000565453 CSTBP04080 98 aaKnown RBP12.46□□□□□ -0.41
CDH3-204ENST00000565453 SERPINA2P20848 420 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 ST3GAL4Q11206 333 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 RCN1Q15293 331 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 LTC4SQ16873 150 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 MPV17LQ2QL34 196 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 LINC00596Q86U02 117 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 FBLIM1Q8WUP2 373 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 CAPSLQ8WWF8 208 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 PAK1IP1Q9NWT1 392 aaPredicted RBP12.46□□□□□ -0.41
CDH3-204ENST00000565453 HSPE1-MOB4S4R3N1 261 aa12.46□□□□□ -0.41
CDH3-204ENST00000565453 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 ZNF780AO75290 641 aaPredicted RBP12.45□□□□□ -0.42
CDH3-204ENST00000565453 SNRNP70P08621 437 aaKnown RBP12.45□□□□□ -0.42
CDH3-204ENST00000565453 FAM106CPP0CH98 169 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 MED21Q13503 144 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 OXLD1Q5BKU9 147 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 C10orf99Q6UWK7 81 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 CENPVQ7Z7K6 275 aaPredicted RBP12.45□□□□□ -0.42
CDH3-204ENST00000565453 LYPD6Q86Y78 171 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 DRAM1Q8N682 238 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 OR56B4Q8NH76 319 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 CHCHD3Q9NX63 227 aaKnown RBP12.45□□□□□ -0.42
CDH3-204ENST00000565453 CNOT2Q9NZN8 540 aaKnown RBP12.45□□□□□ -0.42
CDH3-204ENST00000565453 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.45□□□□□ -0.42
CDH3-204ENST00000565453 MOB4Q9Y3A3 225 aa12.45□□□□□ -0.42
CDH3-204ENST00000565453 EFCAB10A6NFE3 127 aa12.44□□□□□ -0.42
CDH3-204ENST00000565453 M0QZK8 103 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms