RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PRR18Q8N4B5 295 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 TMEM222Q9H0R3 208 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 BCO1Q9HAY6 547 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 A0A0G2JRQ6 117 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 DHHO43323 396 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 PITX3O75364 302 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 METTL15P1P0C7V9 234 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 PTGDSP41222 190 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 NUBP1P53384 320 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 TLE4Q04727 773 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 C9orf135Q5VTT2 229 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 OR4X1Q8NH49 305 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 CLDN34H7C241 214 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 IGFBP4P22692 258 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 TAS2R60P59551 318 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 COL10A1Q03692 680 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 ZNF787Q6DD87 383 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 SPTSSAQ969W0 71 aa17.66■□□□□ 0.42
MAP1LC3B-206ENST00000564844 C2CD4DB7Z1M9 353 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 HSPB1P04792 205 aaKnown RBP17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 ZNF16P17020 682 aaPredicted RBP17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 TSPAN7P41732 249 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 ZNF506Q5JVG8 444 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 FAM90A2PQ658T7 463 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 OR2M3Q8NG83 312 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 GPR87Q9BY21 358 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 C8orf33Q9H7E9 229 aaPredicted RBP17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 MYOTQ9UBF9 498 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 TCAPO15273 167 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 IFNA10P01566 189 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 CCL2P13500 99 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 ELOVL1Q9BW60 279 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 R4GN57 208 aa17.65■□□□□ 0.42
MAP1LC3B-206ENST00000564844 A0A0U1RQV5 110 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 AQP7P3A6NL99 342 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 GZMBP10144 247 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 IGFBP7Q16270 282 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 NFAM1Q8NET5 270 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PLK3Q9H4B4 646 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 EREGO14944 169 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 AMBPP02760 352 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 TCN2P20062 427 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 BPIFB3P59826 476 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 RELQ04864 619 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 HLA-BQ31612 363 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 RTL6Q6ICC9 239 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 LRTM2Q8N967 370 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 NABP1Q96AH0 204 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF501Q96CX3 271 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 OR6C1Q96RD1 312 aa17.64■□□□□ 0.41
MAP1LC3B-206ENST00000564844 A0A087WWC5 75 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 A0A1W2PPQ1 181 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 C9J4A7 227 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 TNFSF11O14788 317 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DEFA4P12838 97 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF92Q03936 586 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 FGFBP3Q8TAT2 258 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 IL1F10Q8WWZ1 152 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DSPP15924 2871 aaKnown RBP17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 MLF1P58340 268 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF66Q6ZN08 573 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DBX2Q6ZNG2 339 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ANGPTL4Q9BY76 406 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 OR14J1Q9UGF5 321 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 XKRY2A2RUG3 117 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SFTPCP11686 197 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 HIST3H3Q16695 136 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SLC35E3Q7Z769 313 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PLXDC1Q8IUK5 500 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 M1APQ8TC57 530 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DEFB126Q9BYW3 111 aa17.63■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DNAJC13O75165 2243 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 LOC102723971A0A1B0GUV8 181 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF32P17041 273 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DTYMKP23919 212 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 IDH3GP51553 393 aaPredicted RBP17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CCR5P51681 352 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 HIST1H2AAQ96QV6 131 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 BCAT2O15382 392 aaPredicted RBP17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CNOT4O95628 575 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 IFNA5P01569 189 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 IGLV3-1P01715 115 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CD33P20138 364 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF611Q8N823 705 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 EXTL1Q92935 676 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SIGLEC12Q96PQ1 595 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 RBKSQ9H477 322 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 MTCH2Q9Y6C9 303 aa17.62■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ELOA3CA0A087WX78 387 aaPredicted RBP17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 A0A1B0GUS0 222 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 A0A1B0GW64 132 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PDCD6O75340 191 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 NTF4P34130 210 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 GNPNAT1Q96EK6 184 aaPredicted RBP17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 RASL10BQ96S79 203 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SIRT7Q9NRC8 400 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 IGHV3-64DA0A0J9YX35 117 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DUX1O43812 170 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PAX9P55771 341 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF726P1Q15940 193 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms