RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 TRAV14DV4A0A0A6YYC5 116 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 A0A0D9SG52 128 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TEX13DA0A0J9YY54 714 aaPredicted RBP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FAM221AA4D161 298 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TMEM210A6NLX4 147 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 DBX1A6NMT0 343 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 LILRA1O75019 489 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 MPC2O95563 127 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 KNG1P01042 644 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 IFNA2P01563 188 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 IGKV3-15P01624 115 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 GLAP06280 429 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 SLC25A4P12235 298 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 IGFBP2P18065 325 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 PI3P19957 117 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 SERPINF1P36955 418 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 MDH2P40926 338 aaKnown RBP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 UCP2P55851 309 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 RAB14P61106 215 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 EXOSC2Q13868 293 aaKnown RBP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 RBM39Q14498 530 aaKnown RBP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 ZNF345Q14585 488 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 OR8G1Q15617 311 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 C11orf87Q6NUJ2 197 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TMEM65Q6PI78 240 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FIP1L1Q6UN15 594 aaKnown RBP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 Q6ZS49 121 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 MOB1BQ7L9L4 216 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 C1orf174Q8IYL3 243 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 CCDC71LQ8N9Z2 235 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 WDR31Q8NA23 367 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 GTF3AQ92664 365 aaKnown RBP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TOMM40LQ969M1 308 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 S100PBPQ96BU1 408 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 PIK3IP1Q96FE7 263 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 WFIKKN1Q96NZ8 548 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 RTBDNQ9BSG5 229 aaPredicted RBP6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 NMES1Q9C002 83 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 OR51I2Q9H344 312 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 DECR2Q9NUI1 292 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 C1orf123Q9NWV4 160 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 RDH8Q9NYR8 311 aa6.31□□□□□ -1.4
MAP1LC3B-205ENST00000564638 CADP27708 2225 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 ROS1P08922 2347 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 C13orf42A0A1B0GVH6 325 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 KANTRA0A1W2PQU2 76 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 CRYM-AS1A6NIL9 109 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 OR5H1A6NKK0 313 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TIMM8AO60220 97 aaPredicted RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 OR2F2O95006 317 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 DIRAS3O95661 229 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 NAPSAO96009 420 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 IGLV1-44P01699 117 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 CTXN2P0C2S0 81 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 CECR9P0C854 216 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 PET100P0DJ07 73 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 HOXB4P17483 251 aaPredicted RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 GLRA1P23415 457 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 GCH1P30793 250 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FCGR2CP31995 323 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 UCP3P55916 312 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FXYD4P59646 89 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 ERVS71-1P61550 626 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 UBA52P62987 128 aaKnown RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 SUPT4H1P63272 117 aaKnown RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TLE4Q04727 773 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 MZT1Q08AG7 82 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 OR2F1Q13607 317 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 DAZAP2Q15038 168 aaPredicted RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 PDCD1Q15116 288 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 ANKRD55Q3KP44 614 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 LRRC37A5PQ49AS3 106 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 ZNF660Q6AZW8 331 aaPredicted RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 BRICD5Q6PL45 260 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 DHRS11Q6UWP2 260 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 ZNF546Q86UE3 836 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 SLC38A6Q8IZM9 456 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FAM185AQ8N0U4 392 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 OR8H3Q8N146 312 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FAM169BQ8N8A8 192 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 SUMF2Q8NBJ7 301 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FAM222BQ8WU58 562 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 PPP1R1CQ8WVI7 109 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 MOB3AQ96BX8 217 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 MARS2Q96GW9 593 aaKnown RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 ZNF488Q96MN9 340 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 VRK1Q99986 396 aaPredicted RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 C1QTNF6Q9BXI9 259 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 IFT22Q9H7X7 185 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 METTL8Q9H825 291 aaKnown RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 Q9N2K0 584 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 IL36RNQ9UBH0 155 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 PURGQ9UJV8 347 aaKnown RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 FBXO9Q9UK97 447 aaPredicted RBP6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TNFSF18Q9UNG2 199 aa6.3□□□□□ -1.4
MAP1LC3B-205ENST00000564638 TRBV6-6A0A0A6YYG2 114 aa6.29□□□□□ -1.4
MAP1LC3B-205ENST00000564638 IGHV2OR16-5A0A0B4J2B6 119 aa6.29□□□□□ -1.4
MAP1LC3B-205ENST00000564638 POM121CA8CG34 1229 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms