RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 CMTM3Q96MX0 182 aa12.77□□□□□ -0.37
CDH11-209ENST00000564317 TMPRSS13Q9BYE2 586 aa12.77□□□□□ -0.37
CDH11-209ENST00000564317 C6orf62Q9GZU0 229 aaPredicted RBP12.77□□□□□ -0.37
CDH11-209ENST00000564317 ONECUT1Q9UBC0 465 aa12.77□□□□□ -0.37
CDH11-209ENST00000564317 ABCA1O95477 2261 aa12.77□□□□□ -0.37
CDH11-209ENST00000564317 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.37
CDH11-209ENST00000564317 TRAV18A0A075B6X5 111 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 A0A0A6YYH2 397 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 A0A0G2JMP0 313 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 A0A0X1KG70 313 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 FUOMA2VDF0 154 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 A6NJ64 397 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 SCGNO76038 276 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 AVPP01185 164 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 GLP1RP43220 463 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 ERVFRD-1P60508 538 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 ARF6P62330 175 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 MADCAM1Q13477 382 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 CDNFQ49AH0 187 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 FAHD2BQ6P2I3 314 aaPredicted RBP12.76□□□□□ -0.37
CDH11-209ENST00000564317 BTNL3Q6UXE8 466 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 CLEC9AQ6UXN8 241 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 Q8N7P7 452 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 OR4M2Q8NGB6 313 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 OR4K15Q8NH41 348 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 MRGPRDQ8TDS7 321 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 CCDC107Q8WV48 283 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 CORO2AQ92828 525 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 S100A16Q96FQ6 103 aaKnown RBP12.76□□□□□ -0.37
CDH11-209ENST00000564317 FAHD2AQ96GK7 314 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 NCOR1P1Q9H4R4 102 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDH11-209ENST00000564317 YAE1D1Q9NRH1 226 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 LPAR3Q9UBY5 353 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 OPN4Q9UHM6 478 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 LINC00312Q9Y6C7 94 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 ZANQ9Y493 2812 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 F8P00451 2351 aa12.76□□□□□ -0.37
CDH11-209ENST00000564317 TMEM235A6NFC5 223 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 FAM25AB3EWG3 89 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 FAM25CB3EWG5 89 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 FAM25GB3EWG6 89 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 RGS5O15539 181 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 XRCC3O43542 346 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 CA11O75493 328 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 NAPSAO96009 420 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 CGB3P0DN86 165 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 CGB7P0DN87 165 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 PTHLHP12272 177 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 MMP9P14780 707 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 DLX1P56177 255 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 TAS2R20P59543 309 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 PRB3Q04118 309 aaPredicted RBP12.75□□□□□ -0.37
CDH11-209ENST00000564317 CNPY1Q3B7I2 92 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 C1orf229Q6ZS94 237 aaPredicted RBP12.75□□□□□ -0.37
CDH11-209ENST00000564317 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 KIR3DL3Q8N743 410 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 PHF21AQ96BD5 680 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 CMSS1Q9BQ75 279 aaKnown RBP12.75□□□□□ -0.37
CDH11-209ENST00000564317 DIABLOQ9NR28 239 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 CELSR1Q9NYQ6 3014 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 OR6C3Q9NZP0 311 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 KCNS2Q9ULS6 477 aa12.75□□□□□ -0.37
CDH11-209ENST00000564317 UBE2J1Q9Y385 318 aaPredicted RBP12.75□□□□□ -0.37
CDH11-209ENST00000564317 DOCK11Q5JSL3 2073 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 TRGV10A0A0A0MS01 117 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 SERPINE3A8MV23 424 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 GSTP1P09211 210 aaKnown RBP12.74□□□□□ -0.37
CDH11-209ENST00000564317 ZNF728P0DKX0 622 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 RCC1P18754 421 aaPredicted RBP12.74□□□□□ -0.37
CDH11-209ENST00000564317 GATA3P23771 443 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 GDNFP39905 211 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 C17orf58Q2M2W7 97 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 CR1LQ2VPA4 569 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 TMEM69Q5SWH9 247 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 C5orf24Q7Z6I8 188 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 NUDCD2Q8WVJ2 157 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 DMRTB1Q96MA1 342 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 WDFY2Q96P53 400 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 TBX15Q96SF7 602 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 C7orf69Q9H7B7 122 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 AUNIPQ9H7T9 357 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 CHMP1AQ9HD42 196 aaPredicted RBP12.74□□□□□ -0.37
CDH11-209ENST00000564317 C12orf4Q9NQ89 552 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 EXTL2Q9UBQ6 330 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 KPTNQ9Y664 436 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 A3GALT2U3KPV4 340 aa12.74□□□□□ -0.37
CDH11-209ENST00000564317 DSCAML1Q8TD84 2053 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 TRBV6-6A0A0A6YYG2 114 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 C17orf98A8MV24 154 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 J3QLI3 93 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 M0R1W7 72 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 SSX5O60225 188 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 MMP23AO75900 390 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 CD3GP09693 182 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 SSTR5P35346 364 aa12.73□□□□□ -0.37
CDH11-209ENST00000564317 PRAMEF5Q5TYX0 476 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms