RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ING3Q9NXR8 418 aa14.08□□□□□ -0.16
CMTM3-208ENST00000564247 DOCK11Q5JSL3 2073 aa14.08□□□□□ -0.16
CMTM3-208ENST00000564247 TMEM30CPA0ZSE6 113 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 POM121CA8CG34 1229 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 GPR37O15354 613 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 RBBP9O75884 186 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 LPLP06858 475 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 PTHLHP12272 177 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 ERP29P30040 261 aaKnown RBP14.07□□□□□ -0.16
CMTM3-208ENST00000564247 NPY4RP50391 375 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 AESQ08117 197 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 SLC35E4Q6ICL7 350 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 TRAPPC6BQ86SZ2 158 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 RTN4RL2Q86UN3 420 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 SRRQ9GZT4 340 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 C12orf4Q9NQ89 552 aa14.07□□□□□ -0.16
CMTM3-208ENST00000564247 ELF5Q9UKW6 265 aaPredicted RBP14.07□□□□□ -0.16
CMTM3-208ENST00000564247 GSTZ1O43708 216 aaPredicted RBP14.06□□□□□ -0.16
CMTM3-208ENST00000564247 MT-ND4P03905 459 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 EDDM3BP56851 147 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 GUCA2AQ02747 115 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 EDDM3AQ14507 147 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 ZNF79Q15937 498 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 ZNF497Q6ZNH5 498 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 OR52I2Q8NH67 350 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 SETD6Q8TBK2 473 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 GPX8Q8TED1 209 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 SMIM4Q8WVI0 70 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 NUDCD2Q8WVJ2 157 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 DYRK2Q92630 601 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 RAB39BQ96DA2 213 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 THAP7Q9BT49 309 aaPredicted RBP14.06□□□□□ -0.16
CMTM3-208ENST00000564247 IFT46Q9NQC8 304 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 CLN8Q9UBY8 286 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 TRAPPC2LQ9UL33 140 aa14.06□□□□□ -0.16
CMTM3-208ENST00000564247 JMJD1CQ15652 2540 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 MEIKINA0A087WXM9 373 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 IGHV4-61A0A0C4DH41 118 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 A0A1B0GW55 424 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 MEIOCA2RUB1 952 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4L2P0CJ85 424 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4L3P0CJ86 424 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4L4P0CJ87 422 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4L5P0CJ88 424 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4L6P0CJ89 424 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4L7P0CJ90 424 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 SELLP14151 372 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DTYMKP23919 212 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 INPP1P49441 399 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 P2RX3P56373 397 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 GNB2P62879 340 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DGCR2P98153 550 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 PAX5Q02548 391 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 SSBP1Q04837 148 aaKnown RBP14.05□□□□□ -0.16
CMTM3-208ENST00000564247 ESCO2Q56NI9 601 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 RNASE12Q5GAN4 147 aaKnown RBP14.05□□□□□ -0.16
CMTM3-208ENST00000564247 RSBN1Q5VWQ0 802 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4L9Q6RFH8 374 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-208ENST00000564247 H1FXQ92522 213 aaKnown RBP14.05□□□□□ -0.16
CMTM3-208ENST00000564247 GCDHQ92947 438 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-208ENST00000564247 OCSTAMPQ9BR26 566 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 CCDC32Q9BV29 185 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 ST6GALNAC5Q9BVH7 336 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 NCOR1P1Q9H4R4 102 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 YAE1D1Q9NRH1 226 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 CTSZQ9UBR2 303 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 DUX4Q9UBX2 424 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 MGAT4AQ9UM21 535 aa14.05□□□□□ -0.16
CMTM3-208ENST00000564247 TRBV6-6A0A0A6YYG2 114 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 A8MV72 311 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-208ENST00000564247 F5H0A9 414 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-208ENST00000564247 SSX5O60225 188 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 CRLF1O75462 422 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 ECDO95905 644 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-208ENST00000564247 NAPSAO96009 420 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 GSTT2BP0CG30 244 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 IGHV4-31P0DP07 118 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 GLIPR1P48060 266 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 GZMKP49863 264 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 ACTBP60709 375 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 ACTG1P63261 375 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 CD276Q5ZPR3 534 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 TRIQKQ629K1 86 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 WDR25Q64LD2 544 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-208ENST00000564247 CYB5R2Q6BCY4 276 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 GAPTQ8N292 157 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 ZNF565Q8N9K5 539 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 OR4K15Q8NH41 348 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 CLDND2Q8NHS1 167 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 CCDC107Q8WV48 283 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 COQ2Q96H96 371 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 HDHD3Q9BSH5 251 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-208ENST00000564247 KCNIP1Q9NZI2 227 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 OR6C3Q9NZP0 311 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 LPAR3Q9UBY5 353 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 MTFP1Q9UDX5 166 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 KIF25Q9UIL4 384 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 MALRD1Q5VYJ5 2156 aa14.04□□□□□ -0.16
CMTM3-208ENST00000564247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.04□□□□□ -0.164e-6■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms