RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 GOSR1O95249 250 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 TK1P04183 234 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 OR4E1P0C645 316 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 OR5H8P0DN80 308 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 ANXA3P12429 323 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 ANXA7P20073 488 aaKnown RBP8.16□□□□□ -1.1
UBFD1-202ENST00000563366 GNLYP22749 145 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 DUSP1P28562 367 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 HERV-K104P61576 105 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 TFF3Q07654 80 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 TMEM128Q5BJH2 165 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 ATPAF1Q5TC12 328 aaPredicted RBP8.16□□□□□ -1.1
UBFD1-202ENST00000563366 LPCAT3Q6P1A2 487 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 DHRS11Q6UWP2 260 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF497Q6ZNH5 498 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF826PQ6ZT77 177 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 SLC36A1Q7Z2H8 476 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 TMED4Q7Z7H5 227 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 PEG10Q86TG7 708 aaKnown RBP8.16□□□□□ -1.1
UBFD1-202ENST00000563366 SLC25A42Q86VD7 318 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 MOGAT3Q86VF5 341 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 OR4A4PQ8NGN8 299 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 LINC01560Q8TB33 94 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 ITLN1Q8WWA0 313 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 C1orf159Q96HA4 380 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 HDHD3Q9BSH5 251 aaPredicted RBP8.16□□□□□ -1.1
UBFD1-202ENST00000563366 TRAF4Q9BUZ4 470 aaPredicted RBP8.16□□□□□ -1.1
UBFD1-202ENST00000563366 WDR13Q9H1Z4 485 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 DECR2Q9NUI1 292 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF69Q9UC07 566 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 OR14J1Q9UGF5 321 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 FLVCR2Q9UPI3 526 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 PPP1R3CQ9UQK1 317 aa8.16□□□□□ -1.1
UBFD1-202ENST00000563366 TMEM30CPA0ZSE6 113 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 OR2AT4A6NND4 320 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 SIRPB1O00241 398 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 HSPB6O14558 160 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 FABP7O15540 132 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 LHBP01229 141 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 HLA-AP01891 365 aaKnown RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 MUC1P15941 1255 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 SNRPD2P62316 118 aaKnown RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 HLA-DRB3P79483 266 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 PDCD1Q15116 288 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 C21orf62-AS1Q17RA5 79 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF672Q499Z4 452 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ZFP69Q49AA0 526 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 SLC35E4Q6ICL7 350 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF880Q6PDB4 577 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 TCTE3Q8IZS6 198 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 SPICQ8N5J4 248 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 GCSAMQ8N6F7 178 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 TMEM185AQ8NFB2 350 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 MRPL30Q8TCC3 161 aaKnown RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 MARCH1Q8TCQ1 289 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF431Q8TF32 576 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ITLN2Q8WWU7 325 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 MAFIPQ8WZ33 124 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF486Q96H40 463 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF2Q9BSG1 426 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 TMEM204Q9BSN7 226 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 GCM1Q9NP62 436 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 RAB9BQ9NP90 201 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 CISD1Q9NZ45 108 aaKnown RBP8.15□□□□□ -1.1
UBFD1-202ENST00000563366 KCNIP1Q9NZI2 227 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 ZNF581Q9P0T4 197 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 SLC23A1Q9UHI7 598 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 GPR132Q9UNW8 380 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 WIPI2Q9Y4P8 454 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 PLCE1Q9P212 2302 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 COL6A6A6NMZ7 2263 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 CADP27708 2225 aa8.15□□□□□ -1.1
UBFD1-202ENST00000563366 DYSFO75923 2080 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 PIGBOS1A0A0B4J2F0 54 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 IGHV3-64DA0A0J9YX35 117 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 B8ZZF3 427 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 NPIPB11E5RHQ5 1161 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 E7EQL1 145 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 SDCBPO00560 298 aaPredicted RBP8.14□□□□□ -1.11
UBFD1-202ENST00000563366 ZG16O60844 167 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 SULT1A3P0DMM9 295 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 SULT1A4P0DMN0 295 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 PGAM2P15259 253 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 EIF2B2P49770 351 aaKnown RBP8.14□□□□□ -1.11
UBFD1-202ENST00000563366 PPOXP50336 477 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 UCP3P55916 312 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 IL13RA1P78552 427 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 KCNJ8Q15842 424 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 C6orf183Q5T699 404 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 AADACL3Q5VUY0 350 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 LIN54Q6MZP7 749 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 LYG2Q86SG7 212 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 ZNF561Q8N587 486 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 ASCC1Q8N9N2 400 aaKnown RBP8.14□□□□□ -1.11
UBFD1-202ENST00000563366 OR5D13Q8NGL4 314 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 FAM222BQ8WU58 562 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 DYRK2Q92630 601 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 PIK3IP1Q96FE7 263 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 ST6GAL2Q96JF0 529 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms